Analysis of interatomic Contacts of Structural Units in PDB entry:
9MN7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MN7 entry

There are 5 chains in PDB entry 9MN7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LYS 72TYR 389
E
 GLN 218SER 1230
N
 G 23 A 52
R
 G 3 G 8
T
 T -1 C 28
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 9MN7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
80 90Right-handed alpha
Helix 2
AA2
B
107 115Right-handed alpha
Helix 3
AA3
B
129 135Right-handed alpha
Helix 4
AA4
B
168 177Right-handed alpha
Helix 5
AA5
B
199 213Right-handed alpha
Helix 6
AA6
B
215 219Right-handed 310
Helix 7
AA7
B
231 237Right-handed alpha
Helix 8
AA8
B
248 258Right-handed alpha
Helix 9
AA9
B
316 328Right-handed alpha
Helix 10
AB1
B
334 343Right-handed alpha
Helix 11
AB2
B
346 355Right-handed alpha
Helix 12
AB3
B
366 379Right-handed alpha
Helix 13
AB4
E
220 236Right-handed alpha
Helix 14
AB5
E
238 249Right-handed alpha
Helix 15
AB6
E
260 274Right-handed alpha
Helix 16
AB7
E
277 290Right-handed alpha
Helix 17
AB8
E
295 309Right-handed alpha
Helix 18
AB9
E
312 327Right-handed alpha
Helix 19
AC1
E
329 336Right-handed alpha
Helix 20
AC2
E
340 353Right-handed alpha
Helix 21
AC3
E
392 410Right-handed alpha
Helix 22
AC4
E
424 462Right-handed alpha
Helix 23
AC5
E
467 472Right-handed alpha
Helix 24
AC6
E
475 489Right-handed alpha
Helix 25
AC7
E
497 520Right-handed alpha
Helix 26
AC8
E
521 538Right-handed alpha
Helix 27
AC9
E
548 556Right-handed alpha
Helix 28
AD1
E
568 587Right-handed alpha
Helix 29
AD2
E
624 634Right-handed alpha
Helix 30
AD3
E
644 646Right-handed 310
Helix 31
AD4
E
679 687Right-handed alpha
Helix 32
AD5
E
692 704Right-handed alpha
Helix 33
AD6
E
710 723Right-handed alpha
Helix 34
AD7
E
758 789Right-handed alpha
Helix 35
AD8
E
818 824Right-handed alpha
Helix 36
AD9
E
836 850Right-handed alpha
Helix 37
AE1
E
856 867Right-handed alpha
Helix 38
AE2
E
867 877Right-handed alpha
Helix 39
AE3
E
883 888Right-handed 310
Helix 40
AE4
E
890 906Right-handed alpha
Helix 41
AE5
E
925 936Right-handed alpha
Helix 42
AE6
E
937 944Right-handed alpha
Helix 43
AE7
E
954 971Right-handed alpha
Helix 44
AE8
E
975 982Right-handed alpha
Helix 45
AE9
E
986 997Right-handed alpha
Helix 46
AF1
E
1004 1010Right-handed alpha
Helix 47
AF2
E
1011 1016Right-handed alpha
Helix 48
AF3
E
1024 1034Right-handed alpha
Helix 49
AF4
E
1036 1041Right-handed alpha
Helix 50
AF5
E
1044 1064Right-handed alpha
Helix 51
AF6
E
1111 1141Right-handed alpha
Helix 52
AF7
E
1159 1177Right-handed alpha
Helix 53
AF8
E
1178 1192Right-handed alpha
Helix 54
AF9
E
1196 1200Right-handed 310
Helix 55
AG1
E
1201 1209Right-handed alpha
Helix 56
AG2
E
1218 1225Right-handed 310
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There are 11 sheets in PDB entry 9MN7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
120 122first strand
Strand 2
B
99 101parallel
Strand 3
B
190 193parallel
Strand 4
B
224 230parallel
Strand 5
B
296 299anti-parallel
Strand 6
B
262 264anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
411 415first strand
Strand 2
E
638 642anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
495 496first strand
Strand 2
E
616 623anti-parallel
Strand 3
E
606 613anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
588 590first strand
Strand 2
E
602 604anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
794 795first strand
Strand 2
E
706 709anti-parallel
Strand 3
E
825 827anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
798 800first strand
Strand 2
E
806 808anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
831 832first strand
Strand 2
E
914 915anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1146 1149first strand
Strand 2
E
1152 1155anti-parallel
Strand 3
E
919 923anti-parallel
Strand 4
E
1229 1230anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1069 1071first strand
Strand 2
E
1077 1079anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1083 1084first strand
Strand 2
E
1109 1110anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1087 1090first strand
Strand 2
E
1099 1102anti-parallel
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