Analysis of interatomic Contacts of Structural Units in PDB entry:
9MOJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MOJ entry

There are 4 chains in PDB entry 9MOJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLU 148
B	MET 1	GLU 148
C	MET 1	ILE 176
D	MET 1	ASP 174

There are 25 helices in PDB entry 9MOJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1	12	Right-handed alpha
Helix 2	AA2	A	19	34	Right-handed alpha
Helix 3	AA3	A	38	67	Right-handed alpha
Helix 4	AA4	A	74	93	Right-handed alpha
Helix 5	AA5	A	128	137	Right-handed alpha
Helix 6	AA6	B	2	12	Right-handed alpha
Helix 7	AA7	B	19	33	Right-handed alpha
Helix 8	AA8	B	34	36	Right-handed 310
Helix 9	AA9	B	38	67	Right-handed alpha
Helix 10	AB1	B	74	93	Right-handed alpha
Helix 11	AB2	B	128	137	Right-handed alpha
Helix 12	AB3	C	2	13	Right-handed alpha
Helix 13	AB4	C	48	57	Right-handed alpha
Helix 14	AB5	C	67	81	Right-handed alpha
Helix 15	AB6	C	94	110	Right-handed alpha
Helix 16	AB7	C	111	143	Right-handed alpha
Helix 17	AB8	C	147	152	Right-handed alpha
Helix 18	AB9	C	154	176	Right-handed alpha
Helix 19	AC1	D	2	14	Right-handed alpha
Helix 20	AC2	D	48	57	Right-handed alpha
Helix 21	AC3	D	67	81	Right-handed alpha
Helix 22	AC4	D	94	110	Right-handed alpha
Helix 23	AC5	D	111	143	Right-handed alpha
Helix 24	AC6	D	146	153	Right-handed alpha
Helix 25	AC7	D	154	172	Right-handed alpha

There are 10 sheets in PDB entry 9MOJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	99	first strand
Strand 2	A	102	107	anti-parallel
Strand 3	A	123	127	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	99	first strand
Strand 2	A	102	107	anti-parallel
Strand 3	A	140	142	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	111	113	first strand
Strand 2	A	116	118	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	99	first strand
Strand 2	B	102	107	anti-parallel
Strand 3	B	123	127	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	99	first strand
Strand 2	B	102	107	anti-parallel
Strand 3	B	140	142	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	111	113	first strand
Strand 2	B	116	118	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	47	first strand
Strand 2	C	17	22	anti-parallel
Strand 3	C	60	62	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	30	first strand
Strand 2	C	34	38	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	43	47	first strand
Strand 2	D	17	22	anti-parallel
Strand 3	D	60	62	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	26	30	first strand
Strand 2	D	34	38	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MOJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MOJ