Analysis of interatomic Contacts of Structural Units in PDB entry:
9MPV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MPV entry

There are 9 chains in PDB entry 9MPV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
G	ARG 562	THR 655
H	GLU 590	THR 655
I	LEU 558	THR 655
A	ASN 199	PRO 774
B	ASN 199	PRO 774
C	ASN 199	PRO 774
D	GLU 200	PRO 774
E	ASN 199	PRO 774
F	ASN 199	PRO 774

There are200 helices in PDB entry 9MPV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	621	634	Right-handed alpha
Helix 2	AA2	G	639	655	Right-handed alpha
Helix 3	AA3	H	621	634	Right-handed alpha
Helix 4	AA4	H	639	655	Right-handed alpha
Helix 5	AA5	I	621	634	Right-handed alpha
Helix 6	AA6	I	639	655	Right-handed alpha
Helix 7	AA7	A	202	206	Right-handed 310
Helix 8	AA8	A	209	226	Right-handed alpha
Helix 9	AA9	A	226	233	Right-handed alpha
Helix 10	AB1	A	250	263	Right-handed alpha
Helix 11	AB2	A	271	277	Right-handed alpha
Helix 12	AB3	A	280	296	Right-handed alpha
Helix 13	AB4	A	305	310	Right-handed alpha
Helix 14	AB5	A	318	334	Right-handed alpha
Helix 15	AB6	A	349	353	Right-handed 310
Helix 16	AB7	A	354	359	Right-handed 310
Helix 17	AB8	A	373	385	Right-handed alpha
Helix 18	AB9	A	395	403	Right-handed alpha
Helix 19	AC1	A	407	426	Right-handed alpha
Helix 20	AC2	A	438	445	Right-handed alpha
Helix 21	AC3	A	448	459	Right-handed alpha
Helix 22	AC4	A	475	480	Right-handed 310
Helix 23	AC5	A	482	494	Right-handed alpha
Helix 24	AC6	A	494	499	Right-handed alpha
Helix 25	AC7	A	499	507	Right-handed alpha
Helix 26	AC8	A	523	535	Right-handed alpha
Helix 27	AC9	A	543	553	Right-handed alpha
Helix 28	AD1	A	557	569	Right-handed alpha
Helix 29	AD2	A	580	586	Right-handed alpha
Helix 30	AD3	A	598	610	Right-handed alpha
Helix 31	AD4	A	612	615	Right-handed 310
Helix 32	AD5	A	625	629	Right-handed 310
Helix 33	AD6	A	630	635	Right-handed 310
Helix 34	AD7	A	649	661	Right-handed alpha
Helix 35	AD8	A	671	679	Right-handed alpha
Helix 36	AD9	A	683	716	Right-handed alpha
Helix 37	AE1	A	732	742	Right-handed alpha
Helix 38	AE2	A	748	766	Right-handed alpha
Helix 39	AE3	B	202	206	Right-handed 310
Helix 40	AE4	B	209	226	Right-handed alpha
Helix 41	AE5	B	226	234	Right-handed alpha
Helix 42	AE6	B	250	262	Right-handed alpha
Helix 43	AE7	B	271	277	Right-handed alpha
Helix 44	AE8	B	280	296	Right-handed alpha
Helix 45	AE9	B	305	310	Right-handed alpha
Helix 46	AF1	B	312	316	Right-handed 310
Helix 47	AF2	B	319	336	Right-handed alpha
Helix 48	AF3	B	349	353	Right-handed 310
Helix 49	AF4	B	354	359	Right-handed 310
Helix 50	AF5	B	373	385	Right-handed alpha
Helix 51	AF6	B	395	403	Right-handed alpha
Helix 52	AF7	B	407	428	Right-handed alpha
Helix 53	AF8	B	439	444	Right-handed alpha
Helix 54	AF9	B	448	458	Right-handed alpha
Helix 55	AG1	B	475	480	Right-handed alpha
Helix 56	AG2	B	482	494	Right-handed alpha
Helix 57	AG3	B	494	499	Right-handed alpha
Helix 58	AG4	B	499	506	Right-handed alpha
Helix 59	AG5	B	523	535	Right-handed alpha
Helix 60	AG6	B	543	554	Right-handed alpha
Helix 61	AG7	B	557	569	Right-handed alpha
Helix 62	AG8	B	580	586	Right-handed alpha
Helix 63	AG9	B	598	610	Right-handed alpha
Helix 64	AH1	B	630	635	Right-handed 310
Helix 65	AH2	B	649	661	Right-handed alpha
Helix 66	AH3	B	662	664	Right-handed 310
Helix 67	AH4	B	671	679	Right-handed alpha
Helix 68	AH5	B	683	716	Right-handed alpha
Helix 69	AH6	B	732	742	Right-handed alpha
Helix 70	AH7	B	748	762	Right-handed alpha
Helix 71	AH8	C	202	206	Right-handed 310
Helix 72	AH9	C	209	226	Right-handed alpha
Helix 73	AI1	C	226	233	Right-handed alpha
Helix 74	AI2	C	250	263	Right-handed alpha
Helix 75	AI3	C	271	276	Right-handed alpha
Helix 76	AI4	C	280	296	Right-handed alpha
Helix 77	AI5	C	305	310	Right-handed alpha
Helix 78	AI6	C	318	334	Right-handed alpha
Helix 79	AI7	C	349	353	Right-handed 310
Helix 80	AI8	C	354	359	Right-handed 310
Helix 81	AI9	C	373	386	Right-handed alpha
Helix 82	AJ1	C	395	403	Right-handed alpha
Helix 83	AJ2	C	407	426	Right-handed alpha
Helix 84	AJ3	C	439	444	Right-handed alpha
Helix 85	AJ4	C	448	458	Right-handed alpha
Helix 86	AJ5	C	475	479	Right-handed 310
Helix 87	AJ6	C	482	499	Right-handed alpha
Helix 88	AJ7	C	499	506	Right-handed alpha
Helix 89	AJ8	C	523	535	Right-handed alpha
Helix 90	AJ9	C	543	554	Right-handed alpha
Helix 91	AK1	C	555	557	Right-handed 310
Helix 92	AK2	C	558	569	Right-handed alpha
Helix 93	AK3	C	580	586	Right-handed alpha
Helix 94	AK4	C	598	611	Right-handed alpha
Helix 95	AK5	C	630	634	Right-handed 310
Helix 96	AK6	C	649	661	Right-handed alpha
Helix 97	AK7	C	662	664	Right-handed 310
Helix 98	AK8	C	671	678	Right-handed alpha
Helix 99	AK9	C	683	716	Right-handed alpha
Helix 100	AL1	C	732	740	Right-handed alpha
Helix 101	AL2	C	741	743	Right-handed 310
Helix 102	AL3	C	748	764	Right-handed alpha
Helix 103	AL4	D	202	206	Right-handed 310
Helix 104	AL5	D	209	221	Right-handed alpha
Helix 105	AL6	D	221	226	Right-handed alpha
Helix 106	AL7	D	226	233	Right-handed alpha
Helix 107	AL8	D	250	262	Right-handed alpha
Helix 108	AL9	D	271	277	Right-handed alpha
Helix 109	AM1	D	280	296	Right-handed alpha
Helix 110	AM2	D	305	310	Right-handed alpha
Helix 111	AM3	D	312	316	Right-handed 310
Helix 112	AM4	D	318	334	Right-handed alpha
Helix 113	AM5	D	335	337	Right-handed 310
Helix 114	AM6	D	373	385	Right-handed alpha
Helix 115	AM7	D	395	403	Right-handed alpha
Helix 116	AM8	D	407	426	Right-handed alpha
Helix 117	AM9	D	439	444	Right-handed 310
Helix 118	AN1	D	448	458	Right-handed alpha
Helix 119	AN2	D	475	479	Right-handed 310
Helix 120	AN3	D	482	499	Right-handed alpha
Helix 121	AN4	D	499	507	Right-handed alpha
Helix 122	AN5	D	523	535	Right-handed alpha
Helix 123	AN6	D	543	553	Right-handed alpha
Helix 124	AN7	D	555	557	Right-handed 310
Helix 125	AN8	D	558	569	Right-handed alpha
Helix 126	AN9	D	580	586	Right-handed alpha
Helix 127	AO1	D	599	610	Right-handed alpha
Helix 128	AO2	D	612	616	Right-handed 310
Helix 129	AO3	D	630	634	Right-handed 310
Helix 130	AO4	D	649	661	Right-handed alpha
Helix 131	AO5	D	671	678	Right-handed alpha
Helix 132	AO6	D	683	716	Right-handed alpha
Helix 133	AO7	D	732	740	Right-handed alpha
Helix 134	AO8	D	741	743	Right-handed 310
Helix 135	AO9	D	748	765	Right-handed alpha
Helix 136	AP1	E	210	226	Right-handed alpha
Helix 137	AP2	E	226	233	Right-handed alpha
Helix 138	AP3	E	250	263	Right-handed alpha
Helix 139	AP4	E	271	277	Right-handed alpha
Helix 140	AP5	E	280	296	Right-handed alpha
Helix 141	AP6	E	305	310	Right-handed alpha
Helix 142	AP7	E	312	316	Right-handed 310
Helix 143	AP8	E	318	334	Right-handed alpha
Helix 144	AP9	E	349	353	Right-handed 310
Helix 145	AQ1	E	373	385	Right-handed alpha
Helix 146	AQ2	E	386	388	Right-handed 310
Helix 147	AQ3	E	395	403	Right-handed alpha
Helix 148	AQ4	E	407	428	Right-handed alpha
Helix 149	AQ5	E	438	445	Right-handed alpha
Helix 150	AQ6	E	448	458	Right-handed alpha
Helix 151	AQ7	E	475	479	Right-handed 310
Helix 152	AQ8	E	482	494	Right-handed alpha
Helix 153	AQ9	E	494	499	Right-handed alpha
Helix 154	AR1	E	499	507	Right-handed alpha
Helix 155	AR2	E	523	536	Right-handed alpha
Helix 156	AR3	E	543	553	Right-handed alpha
Helix 157	AR4	E	557	569	Right-handed alpha
Helix 158	AR5	E	580	586	Right-handed alpha
Helix 159	AR6	E	598	610	Right-handed alpha
Helix 160	AR7	E	612	615	Right-handed 310
Helix 161	AR8	E	625	629	Right-handed 310
Helix 162	AR9	E	630	634	Right-handed 310
Helix 163	AS1	E	649	661	Right-handed alpha
Helix 164	AS2	E	662	664	Right-handed 310
Helix 165	AS3	E	671	679	Right-handed alpha
Helix 166	AS4	E	683	716	Right-handed alpha
Helix 167	AS5	E	732	741	Right-handed alpha
Helix 168	AS6	E	748	765	Right-handed alpha
Helix 169	AS7	E	766	768	Right-handed 310
Helix 170	AS8	F	209	226	Right-handed alpha
Helix 171	AS9	F	226	234	Right-handed alpha
Helix 172	AT1	F	250	263	Right-handed alpha
Helix 173	AT2	F	270	276	Right-handed alpha
Helix 174	AT3	F	280	296	Right-handed alpha
Helix 175	AT4	F	305	310	Right-handed alpha
Helix 176	AT5	F	312	316	Right-handed 310
Helix 177	AT6	F	318	334	Right-handed alpha
Helix 178	AT7	F	335	337	Right-handed 310
Helix 179	AT8	F	349	353	Right-handed 310
Helix 180	AT9	F	354	359	Right-handed 310
Helix 181	AU1	F	373	385	Right-handed alpha
Helix 182	AU2	F	395	403	Right-handed alpha
Helix 183	AU3	F	407	428	Right-handed alpha
Helix 184	AU4	F	439	444	Right-handed alpha
Helix 185	AU5	F	448	458	Right-handed alpha
Helix 186	AU6	F	482	499	Right-handed alpha
Helix 187	AU7	F	499	507	Right-handed alpha
Helix 188	AU8	F	523	535	Right-handed alpha
Helix 189	AU9	F	543	554	Right-handed alpha
Helix 190	AV1	F	557	569	Right-handed alpha
Helix 191	AV2	F	580	587	Right-handed alpha
Helix 192	AV3	F	598	610	Right-handed alpha
Helix 193	AV4	F	612	616	Right-handed 310
Helix 194	AV5	F	630	634	Right-handed 310
Helix 195	AV6	F	649	661	Right-handed alpha
Helix 196	AV7	F	662	664	Right-handed 310
Helix 197	AV8	F	671	679	Right-handed alpha
Helix 198	AV9	F	683	716	Right-handed alpha
Helix 199	AW1	F	732	741	Right-handed alpha
Helix 200	AW2	F	748	765	Right-handed alpha

There are 18 sheets in PDB entry 9MPV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	578	580	first strand
Strand 2	G	583	585	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	590	598	first strand
Strand 2	G	601	609	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	592	593	first strand
Strand 2	H	606	607	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	562	566	first strand
Strand 2	I	576	580	anti-parallel
Strand 3	I	583	585	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	592	597	first strand
Strand 2	I	602	607	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	270	first strand
Strand 2	A	299	304	parallel
Strand 3	A	341	347	parallel
Strand 4	A	240	244	parallel
Strand 5	A	365	368	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	538	542	first strand
Strand 2	A	572	576	parallel
Strand 3	A	617	620	parallel
Strand 4	A	513	517	parallel
Strand 5	A	642	644	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	270	first strand
Strand 2	B	299	304	parallel
Strand 3	B	341	347	parallel
Strand 4	B	240	244	parallel
Strand 5	B	365	368	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	538	542	first strand
Strand 2	B	572	576	parallel
Strand 3	B	617	621	parallel
Strand 4	B	513	517	parallel
Strand 5	B	642	644	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	265	270	first strand
Strand 2	C	299	304	parallel
Strand 3	C	341	347	parallel
Strand 4	C	240	244	parallel
Strand 5	C	365	368	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	538	542	first strand
Strand 2	C	572	576	parallel
Strand 3	C	617	621	parallel
Strand 4	C	513	517	parallel
Strand 5	C	642	644	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	265	270	first strand
Strand 2	D	299	304	parallel
Strand 3	D	341	347	parallel
Strand 4	D	241	244	parallel
Strand 5	D	365	368	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	538	542	first strand
Strand 2	D	572	576	parallel
Strand 3	D	618	623	parallel
Strand 4	D	513	517	parallel
Strand 5	D	641	644	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	265	270	first strand
Strand 2	E	299	304	parallel
Strand 3	E	341	347	parallel
Strand 4	E	240	244	parallel
Strand 5	E	363	368	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	538	542	first strand
Strand 2	E	572	576	parallel
Strand 3	E	617	621	parallel
Strand 4	E	513	517	parallel
Strand 5	E	641	644	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	265	268	first strand
Strand 2	F	299	303	parallel
Strand 3	F	341	347	parallel
Strand 4	F	240	244	parallel
Strand 5	F	363	368	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	619	621	first strand
Strand 2	F	513	517	parallel
Strand 3	F	642	644	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	541	542	first strand
Strand 2	F	575	576	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MPV

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MPV