Analysis of interatomic Contacts of Structural Units in PDB entry:
9MRH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MRH entry

There are 4 chains in PDB entry 9MRH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 8LEU 73
A
 VAL 75ASP 379
B
 HIS 9LEU 73
B
 VAL 75ASP 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 9MRH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 18Right-handed 310
Helix 2
AA2
A
65 70Right-handed 310
Helix 3
AA3
A
75 79Right-handed 310
Helix 4
AA4
A
82 88Right-handed 310
Helix 5
AA5
A
89 94Right-handed alpha
Helix 6
AA6
A
161 181Right-handed alpha
Helix 7
AA7
A
182 191Right-handed alpha
Helix 8
AA8
A
193 208Right-handed alpha
Helix 9
AA9
A
227 231Right-handed 310
Helix 10
AB1
A
240 245Right-handed alpha
Helix 11
AB2
A
285 291Right-handed alpha
Helix 12
AB3
B
12 18Right-handed 310
Helix 13
AB4
B
65 70Right-handed 310
Helix 14
AB5
B
75 79Right-handed 310
Helix 15
AB6
B
82 88Right-handed 310
Helix 16
AB7
B
89 94Right-handed alpha
Helix 17
AB8
B
161 181Right-handed alpha
Helix 18
AB9
B
182 191Right-handed alpha
Helix 19
AC1
B
193 208Right-handed alpha
Helix 20
AC2
B
227 231Right-handed 310
Helix 21
AC3
B
240 245Right-handed alpha
Helix 22
AC4
B
285 291Right-handed alpha
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There are 4 sheets in PDB entry 9MRH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 31first strand
Strand 2
A
34 45anti-parallel
Strand 3
A
50 57anti-parallel
Strand 4
A
362 372anti-parallel
Strand 5
A
344 353anti-parallel
Strand 6
A
293 300anti-parallel
Strand 7
A
305 315anti-parallel
Strand 8
A
321 332anti-parallel
Strand 9
A
99 107anti-parallel
Strand 10
A
112 122anti-parallel
Strand 11
A
125 135anti-parallel
Strand 12
A
20 31parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 224first strand
Strand 2
A
212 217anti-parallel
Strand 3
A
275 284anti-parallel
Strand 4
A
259 269anti-parallel
Strand 5
A
250 256anti-parallel
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There are 12 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 31first strand
Strand 2
B
34 45anti-parallel
Strand 3
B
50 57anti-parallel
Strand 4
B
362 372anti-parallel
Strand 5
B
344 353anti-parallel
Strand 6
B
293 300anti-parallel
Strand 7
B
305 315anti-parallel
Strand 8
B
321 332anti-parallel
Strand 9
B
99 107anti-parallel
Strand 10
B
112 122anti-parallel
Strand 11
B
125 135anti-parallel
Strand 12
B
20 31parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
222 224first strand
Strand 2
B
212 216anti-parallel
Strand 3
B
275 284anti-parallel
Strand 4
B
259 269anti-parallel
Strand 5
B
250 256anti-parallel
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