Analysis of interatomic Contacts of Structural Units in PDB entry:
9MRJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MRJ entry

There is 1 chain in PDB entry 9MRJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 10ARG 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 9MRJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 18Right-handed alpha
Helix 2
AA2
A
60 64Right-handed 310
Helix 3
AA3
A
136 140Right-handed 310
Helix 4
AA4
A
182 186Right-handed 310
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There are 3 sheets in PDB entry 9MRJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 31first strand
Strand 2
A
58 59anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 53first strand
Strand 2
A
41 46anti-parallel
Strand 3
A
69 80anti-parallel
Strand 4
A
83 96anti-parallel
Strand 5
A
100 110anti-parallel
Strand 6
A
120 132anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 154first strand
Strand 2
A
157 167anti-parallel
Strand 3
A
172 178anti-parallel
Strand 4
A
188 196anti-parallel
Strand 5
A
202 210anti-parallel
Strand 6
A
213 223anti-parallel
Strand 7
A
229 238anti-parallel
Strand 8
A
241 250anti-parallel
Strand 9
A
145 154anti-parallel
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