Analysis of interatomic Contacts of Structural Units in PDB entry:
9MRR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MRR entry

There are 4 chains in PDB entry 9MRR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 195
B
 MET 1ILE 195
C
 MET 1ILE 195
D
 MET 1ILE 195
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 9MRR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 28Right-handed alpha
Helix 2
AA2
A
43 50Right-handed alpha
Helix 3
AA3
A
50 76Right-handed alpha
Helix 4
AA4
A
95 108Right-handed alpha
Helix 5
AA5
A
112 133Right-handed alpha
Helix 6
AA6
A
140 145Right-handed alpha
Helix 7
AA7
B
2 16Right-handed alpha
Helix 8
AA8
B
16 28Right-handed alpha
Helix 9
AA9
B
43 49Right-handed alpha
Helix 10
AB1
B
50 76Right-handed alpha
Helix 11
AB2
B
95 102Right-handed alpha
Helix 12
AB3
B
112 132Right-handed alpha
Helix 13
AB4
B
142 146Right-handed 310
Helix 14
AB5
C
2 16Right-handed alpha
Helix 15
AB6
C
16 27Right-handed alpha
Helix 16
AB7
C
43 50Right-handed alpha
Helix 17
AB8
C
50 75Right-handed alpha
Helix 18
AB9
C
103 108Right-handed alpha
Helix 19
AC1
C
112 133Right-handed alpha
Helix 20
AC2
C
139 144Right-handed alpha
Helix 21
AC3
D
2 7Right-handed alpha
Helix 22
AC4
D
7 16Right-handed alpha
Helix 23
AC5
D
16 27Right-handed alpha
Helix 24
AC6
D
42 50Right-handed alpha
Helix 25
AC7
D
50 74Right-handed alpha
Helix 26
AC8
D
94 96Right-handed 310
Helix 27
AC9
D
97 102Right-handed alpha
Helix 28
AD1
D
112 133Right-handed alpha
Helix 29
AD2
D
135 139Right-handed 310
Helix 30
AD3
D
141 146Right-handed 310
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There are 6 sheets in PDB entry 9MRR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 152first strand
Strand 2
A
165 169anti-parallel
Strand 3
A
189 191parallel
Strand 4
A
181 183anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 156first strand
Strand 2
A
160 161anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 151first strand
Strand 2
B
166 169anti-parallel
Strand 3
B
189 191parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
148 152first strand
Strand 2
C
165 169anti-parallel
Strand 3
C
189 192parallel
Strand 4
C
180 183anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
148 152first strand
Strand 2
D
165 169anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
181 183first strand
Strand 2
D
189 191anti-parallel
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