Analysis of interatomic Contacts of Structural Units in PDB entry:
9MT4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MT4 entry

There are 18 chains in PDB entry 9MT4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	LEU 11	PRO 454
A	LEU 11	PRO 454
E	MET 1	ARG 132
F	MET 1	LYS 196
P	ALA 2	PRO 144
O	GLN 5	PRO 144
I	THR 3	ASN 109
J	THR 3	LEU 108
L	GLY 2	ASN 109
K	THR 3	ASN 109
M	THR 3	ASN 109
N	THR 3	ASN 109
Q	MET 1	TYR 449
R	TRP 2	TYR 449
C	CYS 2	ARG 133
D	CYS 2	ARG 133
G	ARG 12	ASN 166
H	VAL 28	ASN 166

There are 91 helices in PDB entry 9MT4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	36	39	Right-handed 310
Helix 2	AA2	B	40	52	Right-handed alpha
Helix 3	AA3	B	54	70	Right-handed alpha
Helix 4	AA4	B	84	100	Right-handed alpha
Helix 5	AA5	B	104	113	Right-handed alpha
Helix 6	AA6	B	114	119	Right-handed alpha
Helix 7	AA7	B	211	215	Right-handed 310
Helix 8	AA8	B	220	224	Right-handed 310
Helix 9	AA9	B	225	246	Right-handed alpha
Helix 10	AB1	B	256	261	Right-handed 310
Helix 11	AB2	B	265	282	Right-handed alpha
Helix 12	AB3	B	319	335	Right-handed alpha
Helix 13	AB4	B	338	343	Right-handed alpha
Helix 14	AB5	B	358	388	Right-handed alpha
Helix 15	AB6	B	406	420	Right-handed alpha
Helix 16	AB7	B	426	436	Right-handed alpha
Helix 17	AB8	B	449	453	Right-handed 310
Helix 18	AB9	A	36	39	Right-handed 310
Helix 19	AC1	A	40	52	Right-handed alpha
Helix 20	AC2	A	54	70	Right-handed alpha
Helix 21	AC3	A	84	100	Right-handed alpha
Helix 22	AC4	A	104	113	Right-handed alpha
Helix 23	AC5	A	114	119	Right-handed alpha
Helix 24	AC6	A	211	215	Right-handed 310
Helix 25	AC7	A	220	224	Right-handed 310
Helix 26	AC8	A	225	246	Right-handed alpha
Helix 27	AC9	A	256	261	Right-handed 310
Helix 28	AD1	A	265	282	Right-handed alpha
Helix 29	AD2	A	319	335	Right-handed alpha
Helix 30	AD3	A	338	343	Right-handed alpha
Helix 31	AD4	A	358	388	Right-handed alpha
Helix 32	AD5	A	406	420	Right-handed alpha
Helix 33	AD6	A	426	436	Right-handed alpha
Helix 34	AD7	A	449	453	Right-handed 310
Helix 35	AD8	E	2	6	Right-handed 310
Helix 36	AD9	F	4	20	Right-handed alpha
Helix 37	AE1	F	21	24	Right-handed 310
Helix 38	AE2	F	97	110	Right-handed alpha
Helix 39	AE3	F	114	122	Right-handed alpha
Helix 40	AE4	P	8	12	Right-handed 310
Helix 41	AE5	P	70	84	Right-handed alpha
Helix 42	AE6	O	70	83	Right-handed alpha
Helix 43	AE7	I	5	17	Right-handed alpha
Helix 44	AE8	J	5	15	Right-handed alpha
Helix 45	AE9	L	5	14	Right-handed alpha
Helix 46	AF1	K	5	14	Right-handed alpha
Helix 47	AF2	M	5	14	Right-handed alpha
Helix 48	AF3	N	5	14	Right-handed alpha
Helix 49	AF4	Q	43	51	Right-handed alpha
Helix 50	AF5	Q	55	65	Right-handed alpha
Helix 51	AF6	Q	121	135	Right-handed alpha
Helix 52	AF7	Q	184	194	Right-handed alpha
Helix 53	AF8	Q	208	221	Right-handed alpha
Helix 54	AF9	Q	232	237	Right-handed 310
Helix 55	AG1	Q	246	254	Right-handed alpha
Helix 56	AG2	Q	272	281	Right-handed alpha
Helix 57	AG3	Q	311	321	Right-handed alpha
Helix 58	AG4	Q	345	368	Right-handed alpha
Helix 59	AG5	Q	378	399	Right-handed alpha
Helix 60	AG6	Q	418	423	Right-handed alpha
Helix 61	AG7	R	43	51	Right-handed alpha
Helix 62	AG8	R	55	65	Right-handed alpha
Helix 63	AG9	R	122	134	Right-handed alpha
Helix 64	AH1	R	137	142	Right-handed alpha
Helix 65	AH2	R	184	194	Right-handed alpha
Helix 66	AH3	R	208	220	Right-handed alpha
Helix 67	AH4	R	232	237	Right-handed 310
Helix 68	AH5	R	246	254	Right-handed alpha
Helix 69	AH6	R	271	279	Right-handed alpha
Helix 70	AH7	R	311	321	Right-handed alpha
Helix 71	AH8	R	345	369	Right-handed alpha
Helix 72	AH9	R	378	399	Right-handed alpha
Helix 73	AI1	R	411	415	Right-handed 310
Helix 74	AI2	R	416	423	Right-handed alpha
Helix 75	AI3	C	10	19	Right-handed alpha
Helix 76	AI4	C	30	41	Right-handed alpha
Helix 77	AI5	C	44	63	Right-handed alpha
Helix 78	AI6	C	77	90	Right-handed alpha
Helix 79	AI7	C	104	112	Right-handed alpha
Helix 80	AI8	C	123	128	Right-handed 310
Helix 81	AI9	D	10	19	Right-handed alpha
Helix 82	AJ1	D	23	27	Right-handed 310
Helix 83	AJ2	D	30	41	Right-handed alpha
Helix 84	AJ3	D	44	63	Right-handed alpha
Helix 85	AJ4	D	77	90	Right-handed alpha
Helix 86	AJ5	D	104	112	Right-handed alpha
Helix 87	AJ6	D	123	129	Right-handed 310
Helix 88	AJ7	G	60	62	Right-handed 310
Helix 89	AJ8	G	96	100	Right-handed 310
Helix 90	AJ9	G	131	135	Right-handed 310
Helix 91	AK1	H	131	136	Right-handed 310

There are 55 sheets in PDB entry 9MT4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	76	first strand
Strand 2	B	396	399	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	153	154	first strand
Strand 2	B	120	124	anti-parallel
Strand 3	B	204	208	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	129	first strand
Strand 2	B	146	150	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	164	first strand
Strand 2	B	171	177	anti-parallel
Strand 3	B	196	200	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	306	309	first strand
Strand 2	B	251	255	anti-parallel
Strand 3	A	290	293	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	76	first strand
Strand 2	A	396	399	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	153	154	first strand
Strand 2	A	120	124	anti-parallel
Strand 3	A	204	208	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	129	first strand
Strand 2	A	146	150	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	164	first strand
Strand 2	A	171	177	anti-parallel
Strand 3	A	196	200	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	251	254	first strand
Strand 2	A	306	309	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	7	14	first strand
Strand 2	E	33	44	anti-parallel
Strand 3	E	67	72	anti-parallel
Strand 4	E	115	121	anti-parallel
Strand 5	E	95	104	anti-parallel
Strand 6	E	89	92	anti-parallel
Strand 7	E	7	14	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	20	21	first strand
Strand 2	E	27	28	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	54	58	first strand
Strand 2	E	61	65	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	34	36	first strand
Strand 2	F	54	59	parallel
Strand 3	F	79	95	anti-parallel
Strand 4	F	144	161	anti-parallel
Strand 5	F	125	129	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	71	74	first strand
Strand 2	F	79	95	anti-parallel
Strand 3	F	144	161	anti-parallel
Strand 4	F	135	137	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	40	41	first strand
Strand 2	F	45	46	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	169	176	first strand
Strand 2	F	187	194	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	19	21	first strand
Strand 2	P	13	16	anti-parallel
Strand 3	P	93	98	anti-parallel
Strand 4	P	106	115	anti-parallel
Strand 5	P	128	139	anti-parallel
Strand 6	P	59	65	anti-parallel
Strand 7	P	30	34	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	39	43	first strand
Strand 2	P	49	53	anti-parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	19	21	first strand
Strand 2	O	13	16	anti-parallel
Strand 3	O	93	98	anti-parallel
Strand 4	O	106	115	anti-parallel
Strand 5	O	127	134	anti-parallel
Strand 6	O	59	66	anti-parallel
Strand 7	O	30	34	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	19	21	first strand
Strand 2	O	13	16	anti-parallel
Strand 3	O	93	98	anti-parallel
Strand 4	O	106	115	anti-parallel
Strand 5	O	137	139	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	39	43	first strand
Strand 2	O	49	53	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	41	42	first strand
Strand 2	I	20	24	anti-parallel
Strand 3	I	68	75	anti-parallel
Strand 4	I	83	92	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	52	54	first strand
Strand 2	I	99	107	anti-parallel
Strand 3	I	59	61	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	52	54	first strand
Strand 2	I	99	107	anti-parallel
Strand 3	H	33	40	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	41	42	first strand
Strand 2	J	20	24	anti-parallel
Strand 3	J	71	76	anti-parallel
Strand 4	J	79	85	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	52	53	first strand
Strand 2	J	106	107	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	68	69	first strand
Strand 2	J	91	92	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	3	4	first strand
Strand 2	K	81	92	anti-parallel
Strand 3	K	68	75	anti-parallel
Strand 4	K	20	24	anti-parallel
Strand 5	K	41	42	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	41	42	first strand
Strand 2	L	20	24	anti-parallel
Strand 3	L	68	75	anti-parallel
Strand 4	L	81	92	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	52	54	first strand
Strand 2	L	105	107	anti-parallel
Strand 3	G	28	29	parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	59	63	first strand
Strand 2	L	97	101	anti-parallel
Strand 3	G	21	24	parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	52	54	first strand
Strand 2	K	105	107	anti-parallel
Strand 3	G	33	34	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	59	63	first strand
Strand 2	K	97	103	anti-parallel
Strand 3	G	37	40	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	41	42	first strand
Strand 2	M	20	24	anti-parallel
Strand 3	M	68	75	anti-parallel
Strand 4	M	83	92	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	52	54	first strand
Strand 2	M	105	107	anti-parallel
Strand 3	G	13	14	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	59	63	first strand
Strand 2	M	97	101	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	41	42	first strand
Strand 2	N	20	24	anti-parallel
Strand 3	N	71	75	anti-parallel
Strand 4	N	81	86	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	52	54	first strand
Strand 2	N	105	107	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	60	61	first strand
Strand 2	N	99	100	anti-parallel

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There are 6 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	38	41	first strand
Strand 2	Q	74	78	anti-parallel
Strand 3	Q	25	29	parallel
Strand 4	Q	201	204	parallel
Strand 5	Q	225	230	parallel
Strand 6	Q	259	263	parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	142	147	first strand
Strand 2	Q	154	159	anti-parallel
Strand 3	Q	81	86	anti-parallel
Strand 4	Q	176	181	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	108	113	first strand
Strand 2	Q	97	103	anti-parallel
Strand 3	Q	166	169	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	326	328	first strand
Strand 2	Q	333	335	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	402	408	first strand
Strand 2	Q	429	434	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	440	448	first strand
Strand 2	R	424	434	parallel
Strand 3	R	402	408	anti-parallel

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There are 6 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	38	41	first strand
Strand 2	R	74	78	anti-parallel
Strand 3	R	25	29	parallel
Strand 4	R	201	204	parallel
Strand 5	R	225	230	parallel
Strand 6	R	259	263	parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	143	145	first strand
Strand 2	R	155	158	anti-parallel
Strand 3	R	81	86	anti-parallel
Strand 4	R	176	181	anti-parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	107	112	first strand
Strand 2	R	98	103	anti-parallel
Strand 3	R	166	169	anti-parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	326	329	first strand
Strand 2	R	332	335	anti-parallel

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There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	71	73	first strand
Strand 2	C	65	68	anti-parallel
Strand 3	D	72	74	anti-parallel
Strand 4	D	66	67	anti-parallel

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There are 4 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	52	58	first strand
Strand 2	G	82	88	parallel
Strand 3	G	123	127	anti-parallel
Strand 4	G	116	118	anti-parallel

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There are 5 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	72	76	first strand
Strand 2	G	155	166	parallel
Strand 3	G	141	149	anti-parallel
Strand 4	G	102	107	anti-parallel
Strand 5	G	111	114	anti-parallel

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There are 4 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	51	58	first strand
Strand 2	H	81	88	parallel
Strand 3	H	123	127	anti-parallel
Strand 4	H	116	118	anti-parallel

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There are 5 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	72	76	first strand
Strand 2	H	155	166	parallel
Strand 3	H	141	149	anti-parallel
Strand 4	H	101	107	anti-parallel
Strand 5	H	111	114	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MT4

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MT4