Analysis of interatomic Contacts of Structural Units in PDB entry:
9MT6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MT6 entry

There are 9 chains in PDB entry 9MT6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	GLU 60	ARG 247
D	GLY 2	CYS 57
G	GLY 2	CYS 57
I	GLY 269	HIS 485
E	GLU 60	ARG 247
H	GLU 60	ARG 247
C	GLY 269	HIS 485
F	GLY 269	HIS 485
A	GLY 2	CYS 57

There are 50 helices in PDB entry 9MT6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	76	83	Right-handed alpha
Helix 2	AA2	B	128	135	Right-handed 310
Helix 3	AA3	B	138	153	Right-handed alpha
Helix 4	AA4	B	182	184	Right-handed 310
Helix 5	AA5	B	185	200	Right-handed alpha
Helix 6	AA6	B	230	240	Right-handed alpha
Helix 7	AA7	D	3	10	Right-handed alpha
Helix 8	AA8	D	10	15	Right-handed alpha
Helix 9	AA9	D	17	42	Right-handed alpha
Helix 10	AB1	D	42	52	Right-handed alpha
Helix 11	AB2	G	3	15	Right-handed alpha
Helix 12	AB3	G	17	42	Right-handed alpha
Helix 13	AB4	G	42	52	Right-handed alpha
Helix 14	AB5	I	273	277	Right-handed 310
Helix 15	AB6	I	286	291	Right-handed alpha
Helix 16	AB7	I	291	296	Right-handed alpha
Helix 17	AB8	I	299	314	Right-handed alpha
Helix 18	AB9	I	332	337	Right-handed alpha
Helix 19	AC1	I	338	351	Right-handed alpha
Helix 20	AC2	I	391	416	Right-handed alpha
Helix 21	AC3	I	419	443	Right-handed alpha
Helix 22	AC4	E	76	84	Right-handed alpha
Helix 23	AC5	E	128	135	Right-handed 310
Helix 24	AC6	E	138	153	Right-handed alpha
Helix 25	AC7	E	186	200	Right-handed alpha
Helix 26	AC8	E	230	240	Right-handed alpha
Helix 27	AC9	H	77	82	Right-handed alpha
Helix 28	AD1	H	128	135	Right-handed 310
Helix 29	AD2	H	138	152	Right-handed alpha
Helix 30	AD3	H	182	184	Right-handed 310
Helix 31	AD4	H	185	200	Right-handed alpha
Helix 32	AD5	H	230	240	Right-handed alpha
Helix 33	AD6	C	273	277	Right-handed 310
Helix 34	AD7	C	287	296	Right-handed alpha
Helix 35	AD8	C	299	315	Right-handed alpha
Helix 36	AD9	C	332	337	Right-handed alpha
Helix 37	AE1	C	338	351	Right-handed alpha
Helix 38	AE2	C	391	416	Right-handed alpha
Helix 39	AE3	C	419	443	Right-handed alpha
Helix 40	AE4	F	273	277	Right-handed 310
Helix 41	AE5	F	287	296	Right-handed alpha
Helix 42	AE6	F	299	314	Right-handed alpha
Helix 43	AE7	F	332	337	Right-handed alpha
Helix 44	AE8	F	338	351	Right-handed alpha
Helix 45	AE9	F	391	416	Right-handed alpha
Helix 46	AF1	F	419	443	Right-handed alpha
Helix 47	AF2	A	3	10	Right-handed alpha
Helix 48	AF3	A	10	15	Right-handed alpha
Helix 49	AF4	A	17	42	Right-handed alpha
Helix 50	AF5	A	42	52	Right-handed alpha

There are 12 sheets in PDB entry 9MT6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	63	first strand
Strand 2	B	68	74	anti-parallel
Strand 3	C	360	366	anti-parallel
Strand 4	C	376	377	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	93	first strand
Strand 2	B	99	103	anti-parallel
Strand 3	B	106	113	anti-parallel
Strand 4	B	214	219	anti-parallel
Strand 5	B	175	178	anti-parallel
Strand 6	B	162	164	anti-parallel
Strand 7	B	124	126	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	271	272	first strand
Strand 2	I	283	284	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	376	377	first strand
Strand 2	I	360	366	anti-parallel
Strand 3	H	68	74	anti-parallel
Strand 4	H	62	63	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	380	381	first strand
Strand 2	I	384	385	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	447	449	first strand
Strand 2	I	480	482	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	62	63	first strand
Strand 2	E	68	74	anti-parallel
Strand 3	F	360	366	anti-parallel
Strand 4	F	376	377	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	100	103	first strand
Strand 2	E	106	113	anti-parallel
Strand 3	E	214	219	anti-parallel
Strand 4	E	175	178	anti-parallel
Strand 5	E	162	164	anti-parallel
Strand 6	E	124	126	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	90	93	first strand
Strand 2	H	99	103	anti-parallel
Strand 3	H	106	113	anti-parallel
Strand 4	H	214	219	anti-parallel
Strand 5	H	175	178	anti-parallel
Strand 6	H	162	164	anti-parallel
Strand 7	H	124	126	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	380	381	first strand
Strand 2	C	384	385	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	447	449	first strand
Strand 2	C	480	482	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	449	450	first strand
Strand 2	F	479	480	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MT6

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MT6