Analysis of interatomic Contacts of Structural Units in PDB entry:
9MTC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MTC entry

There are 4 chains in PDB entry 9MTC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	GLN 8	TYR 1168
A	GLN 8	TYR 1168
C	GLN 8	TYR 1168
D	GLN 8	TYR 1168

There are196 helices in PDB entry 9MTC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	10	15	Right-handed alpha
Helix 2	AA2	B	98	108	Right-handed alpha
Helix 3	AA3	B	131	141	Right-handed alpha
Helix 4	AA4	B	141	150	Right-handed alpha
Helix 5	AA5	B	160	176	Right-handed alpha
Helix 6	AA6	B	196	201	Right-handed 310
Helix 7	AA7	B	246	259	Right-handed alpha
Helix 8	AA8	B	281	294	Right-handed alpha
Helix 9	AA9	B	308	318	Right-handed alpha
Helix 10	AB1	B	332	339	Right-handed alpha
Helix 11	AB2	B	343	357	Right-handed alpha
Helix 12	AB3	B	369	371	Right-handed 310
Helix 13	AB4	B	372	386	Right-handed alpha
Helix 14	AB5	B	395	403	Right-handed alpha
Helix 15	AB6	B	405	415	Right-handed alpha
Helix 16	AB7	B	421	435	Right-handed alpha
Helix 17	AB8	B	437	447	Right-handed alpha
Helix 18	AB9	B	450	455	Right-handed alpha
Helix 19	AC1	B	456	465	Right-handed alpha
Helix 20	AC2	B	471	481	Right-handed alpha
Helix 21	AC3	B	502	512	Right-handed alpha
Helix 22	AC4	B	558	569	Right-handed alpha
Helix 23	AC5	B	571	581	Right-handed alpha
Helix 24	AC6	B	584	602	Right-handed alpha
Helix 25	AC7	B	605	634	Right-handed alpha
Helix 26	AC8	B	634	644	Right-handed alpha
Helix 27	AC9	B	646	650	Right-handed 310
Helix 28	AD1	B	653	662	Right-handed alpha
Helix 29	AD2	B	663	668	Right-handed alpha
Helix 30	AD3	B	669	681	Right-handed alpha
Helix 31	AD4	B	689	699	Right-handed alpha
Helix 32	AD5	B	700	705	Right-handed 310
Helix 33	AD6	B	769	778	Right-handed alpha
Helix 34	AD7	B	778	803	Right-handed alpha
Helix 35	AD8	B	811	834	Right-handed alpha
Helix 36	AD9	B	852	861	Right-handed alpha
Helix 37	AE1	B	862	884	Right-handed alpha
Helix 38	AE2	B	887	904	Right-handed alpha
Helix 39	AE3	B	904	911	Right-handed alpha
Helix 40	AE4	B	916	924	Right-handed alpha
Helix 41	AE5	B	926	953	Right-handed alpha
Helix 42	AE6	B	958	974	Right-handed alpha
Helix 43	AE7	B	979	984	Right-handed alpha
Helix 44	AE8	B	985	988	Right-handed 310
Helix 45	AE9	B	1016	1033	Right-handed alpha
Helix 46	AF1	B	1033	1072	Right-handed alpha
Helix 47	AF2	B	1079	1090	Right-handed alpha
Helix 48	AF3	B	1114	1142	Right-handed alpha
Helix 49	AF4	B	1143	1168	Right-handed alpha
Helix 50	AF5	A	10	15	Right-handed alpha
Helix 51	AF6	A	98	108	Right-handed alpha
Helix 52	AF7	A	131	141	Right-handed alpha
Helix 53	AF8	A	141	150	Right-handed alpha
Helix 54	AF9	A	160	176	Right-handed alpha
Helix 55	AG1	A	196	201	Right-handed 310
Helix 56	AG2	A	246	259	Right-handed alpha
Helix 57	AG3	A	281	294	Right-handed alpha
Helix 58	AG4	A	308	318	Right-handed alpha
Helix 59	AG5	A	332	339	Right-handed alpha
Helix 60	AG6	A	343	357	Right-handed alpha
Helix 61	AG7	A	369	371	Right-handed 310
Helix 62	AG8	A	372	386	Right-handed alpha
Helix 63	AG9	A	395	403	Right-handed alpha
Helix 64	AH1	A	405	415	Right-handed alpha
Helix 65	AH2	A	421	435	Right-handed alpha
Helix 66	AH3	A	437	447	Right-handed alpha
Helix 67	AH4	A	450	455	Right-handed alpha
Helix 68	AH5	A	456	465	Right-handed alpha
Helix 69	AH6	A	471	481	Right-handed alpha
Helix 70	AH7	A	502	512	Right-handed alpha
Helix 71	AH8	A	558	569	Right-handed alpha
Helix 72	AH9	A	571	581	Right-handed alpha
Helix 73	AI1	A	584	602	Right-handed alpha
Helix 74	AI2	A	605	634	Right-handed alpha
Helix 75	AI3	A	634	644	Right-handed alpha
Helix 76	AI4	A	646	650	Right-handed 310
Helix 77	AI5	A	653	662	Right-handed alpha
Helix 78	AI6	A	663	668	Right-handed alpha
Helix 79	AI7	A	669	681	Right-handed alpha
Helix 80	AI8	A	689	699	Right-handed alpha
Helix 81	AI9	A	700	705	Right-handed 310
Helix 82	AJ1	A	769	778	Right-handed alpha
Helix 83	AJ2	A	778	803	Right-handed alpha
Helix 84	AJ3	A	811	834	Right-handed alpha
Helix 85	AJ4	A	852	861	Right-handed alpha
Helix 86	AJ5	A	862	884	Right-handed alpha
Helix 87	AJ6	A	887	904	Right-handed alpha
Helix 88	AJ7	A	904	911	Right-handed alpha
Helix 89	AJ8	A	916	924	Right-handed alpha
Helix 90	AJ9	A	926	953	Right-handed alpha
Helix 91	AK1	A	958	974	Right-handed alpha
Helix 92	AK2	A	979	984	Right-handed alpha
Helix 93	AK3	A	985	988	Right-handed 310
Helix 94	AK4	A	1016	1033	Right-handed alpha
Helix 95	AK5	A	1033	1072	Right-handed alpha
Helix 96	AK6	A	1079	1090	Right-handed alpha
Helix 97	AK7	A	1114	1142	Right-handed alpha
Helix 98	AK8	A	1143	1168	Right-handed alpha
Helix 99	AK9	C	10	15	Right-handed alpha
Helix 100	AL1	C	98	108	Right-handed alpha
Helix 101	AL2	C	131	141	Right-handed alpha
Helix 102	AL3	C	141	150	Right-handed alpha
Helix 103	AL4	C	160	176	Right-handed alpha
Helix 104	AL5	C	196	201	Right-handed 310
Helix 105	AL6	C	246	259	Right-handed alpha
Helix 106	AL7	C	281	294	Right-handed alpha
Helix 107	AL8	C	308	318	Right-handed alpha
Helix 108	AL9	C	332	339	Right-handed alpha
Helix 109	AM1	C	343	357	Right-handed alpha
Helix 110	AM2	C	369	371	Right-handed 310
Helix 111	AM3	C	372	386	Right-handed alpha
Helix 112	AM4	C	395	403	Right-handed alpha
Helix 113	AM5	C	405	415	Right-handed alpha
Helix 114	AM6	C	421	435	Right-handed alpha
Helix 115	AM7	C	437	447	Right-handed alpha
Helix 116	AM8	C	450	455	Right-handed alpha
Helix 117	AM9	C	456	465	Right-handed alpha
Helix 118	AN1	C	471	481	Right-handed alpha
Helix 119	AN2	C	502	512	Right-handed alpha
Helix 120	AN3	C	558	569	Right-handed alpha
Helix 121	AN4	C	571	581	Right-handed alpha
Helix 122	AN5	C	584	602	Right-handed alpha
Helix 123	AN6	C	605	634	Right-handed alpha
Helix 124	AN7	C	634	644	Right-handed alpha
Helix 125	AN8	C	646	650	Right-handed 310
Helix 126	AN9	C	653	662	Right-handed alpha
Helix 127	AO1	C	663	668	Right-handed alpha
Helix 128	AO2	C	669	681	Right-handed alpha
Helix 129	AO3	C	689	699	Right-handed alpha
Helix 130	AO4	C	700	705	Right-handed 310
Helix 131	AO5	C	769	778	Right-handed alpha
Helix 132	AO6	C	778	803	Right-handed alpha
Helix 133	AO7	C	811	834	Right-handed alpha
Helix 134	AO8	C	852	861	Right-handed alpha
Helix 135	AO9	C	862	884	Right-handed alpha
Helix 136	AP1	C	887	904	Right-handed alpha
Helix 137	AP2	C	904	911	Right-handed alpha
Helix 138	AP3	C	916	924	Right-handed alpha
Helix 139	AP4	C	926	953	Right-handed alpha
Helix 140	AP5	C	958	974	Right-handed alpha
Helix 141	AP6	C	979	984	Right-handed alpha
Helix 142	AP7	C	985	988	Right-handed 310
Helix 143	AP8	C	1016	1033	Right-handed alpha
Helix 144	AP9	C	1033	1072	Right-handed alpha
Helix 145	AQ1	C	1079	1090	Right-handed alpha
Helix 146	AQ2	C	1114	1142	Right-handed alpha
Helix 147	AQ3	C	1143	1168	Right-handed alpha
Helix 148	AQ4	D	10	15	Right-handed alpha
Helix 149	AQ5	D	98	108	Right-handed alpha
Helix 150	AQ6	D	131	141	Right-handed alpha
Helix 151	AQ7	D	141	150	Right-handed alpha
Helix 152	AQ8	D	160	176	Right-handed alpha
Helix 153	AQ9	D	196	201	Right-handed 310
Helix 154	AR1	D	246	259	Right-handed alpha
Helix 155	AR2	D	281	294	Right-handed alpha
Helix 156	AR3	D	308	318	Right-handed alpha
Helix 157	AR4	D	332	339	Right-handed alpha
Helix 158	AR5	D	343	357	Right-handed alpha
Helix 159	AR6	D	369	371	Right-handed 310
Helix 160	AR7	D	372	386	Right-handed alpha
Helix 161	AR8	D	395	403	Right-handed alpha
Helix 162	AR9	D	405	415	Right-handed alpha
Helix 163	AS1	D	421	435	Right-handed alpha
Helix 164	AS2	D	437	447	Right-handed alpha
Helix 165	AS3	D	450	455	Right-handed alpha
Helix 166	AS4	D	456	465	Right-handed alpha
Helix 167	AS5	D	471	481	Right-handed alpha
Helix 168	AS6	D	502	512	Right-handed alpha
Helix 169	AS7	D	558	569	Right-handed alpha
Helix 170	AS8	D	571	581	Right-handed alpha
Helix 171	AS9	D	584	602	Right-handed alpha
Helix 172	AT1	D	605	634	Right-handed alpha
Helix 173	AT2	D	634	644	Right-handed alpha
Helix 174	AT3	D	646	650	Right-handed 310
Helix 175	AT4	D	653	662	Right-handed alpha
Helix 176	AT5	D	663	668	Right-handed alpha
Helix 177	AT6	D	669	681	Right-handed alpha
Helix 178	AT7	D	689	699	Right-handed alpha
Helix 179	AT8	D	700	705	Right-handed 310
Helix 180	AT9	D	769	778	Right-handed alpha
Helix 181	AU1	D	778	803	Right-handed alpha
Helix 182	AU2	D	811	834	Right-handed alpha
Helix 183	AU3	D	852	861	Right-handed alpha
Helix 184	AU4	D	862	884	Right-handed alpha
Helix 185	AU5	D	887	904	Right-handed alpha
Helix 186	AU6	D	904	911	Right-handed alpha
Helix 187	AU7	D	916	924	Right-handed alpha
Helix 188	AU8	D	926	953	Right-handed alpha
Helix 189	AU9	D	958	974	Right-handed alpha
Helix 190	AV1	D	979	984	Right-handed alpha
Helix 191	AV2	D	985	988	Right-handed 310
Helix 192	AV3	D	1016	1033	Right-handed alpha
Helix 193	AV4	D	1033	1072	Right-handed alpha
Helix 194	AV5	D	1079	1090	Right-handed alpha
Helix 195	AV6	D	1114	1142	Right-handed alpha
Helix 196	AV7	D	1143	1168	Right-handed alpha

There are 12 sheets in PDB entry 9MTC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	20	first strand
Strand 2	B	67	71	anti-parallel

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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	206	211	first strand
Strand 2	B	75	80	parallel
Strand 3	B	88	94	anti-parallel
Strand 4	B	231	236	parallel
Strand 5	B	184	190	parallel
Strand 6	B	152	155	parallel
Strand 7	B	118	123	parallel
Strand 8	B	273	278	parallel
Strand 9	B	298	301	parallel
Strand 10	B	361	364	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	989	990	first strand
Strand 2	B	1000	1002	anti-parallel
Strand 3	B	1012	1013	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	20	first strand
Strand 2	A	67	71	anti-parallel

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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	206	211	first strand
Strand 2	A	75	80	parallel
Strand 3	A	88	94	anti-parallel
Strand 4	A	231	236	parallel
Strand 5	A	184	190	parallel
Strand 6	A	152	155	parallel
Strand 7	A	118	123	parallel
Strand 8	A	273	278	parallel
Strand 9	A	298	301	parallel
Strand 10	A	361	364	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	989	990	first strand
Strand 2	A	1000	1002	anti-parallel
Strand 3	A	1012	1013	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	16	20	first strand
Strand 2	C	67	71	anti-parallel

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There are 10 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	206	211	first strand
Strand 2	C	75	80	parallel
Strand 3	C	88	94	anti-parallel
Strand 4	C	231	236	parallel
Strand 5	C	184	190	parallel
Strand 6	C	152	155	parallel
Strand 7	C	118	123	parallel
Strand 8	C	273	278	parallel
Strand 9	C	298	301	parallel
Strand 10	C	361	364	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	989	990	first strand
Strand 2	C	1000	1002	anti-parallel
Strand 3	C	1012	1013	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	16	20	first strand
Strand 2	D	67	71	anti-parallel

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There are 10 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	206	211	first strand
Strand 2	D	75	80	parallel
Strand 3	D	88	94	anti-parallel
Strand 4	D	231	236	parallel
Strand 5	D	184	190	parallel
Strand 6	D	152	155	parallel
Strand 7	D	118	123	parallel
Strand 8	D	273	278	parallel
Strand 9	D	298	301	parallel
Strand 10	D	361	364	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	989	990	first strand
Strand 2	D	1000	1002	anti-parallel
Strand 3	D	1012	1013	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MTC

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MTC