Analysis of interatomic Contacts of Structural Units in PDB entry:
9MTY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MTY entry

There are 7 chains in PDB entry 9MTY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 6ASN 322
B
 THR 6ASN 322
C
 A 1 G 36
D
 A -23 C -1
F
 T 1 C 15
E
 G -23 A -1
G
 G 1 T 15
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 9MTY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 55Right-handed alpha
Helix 2
AA2
A
66 72Right-handed alpha
Helix 3
AA3
A
88 101Right-handed alpha
Helix 4
AA4
A
112 138Right-handed alpha
Helix 5
AA5
A
140 165Right-handed alpha
Helix 6
AA6
A
168 173Right-handed alpha
Helix 7
AA7
A
182 194Right-handed alpha
Helix 8
AA8
A
195 199Right-handed 310
Helix 9
AA9
A
201 210Right-handed alpha
Helix 10
AB1
A
230 248Right-handed alpha
Helix 11
AB2
A
249 264Right-handed alpha
Helix 12
AB3
A
265 267Right-handed 310
Helix 13
AB4
A
269 298Right-handed alpha
Helix 14
AB5
B
46 55Right-handed alpha
Helix 15
AB6
B
66 72Right-handed alpha
Helix 16
AB7
B
73 74Right-handed 310
Helix 17
AB8
B
86 88Right-handed 310
Helix 18
AB9
B
89 101Right-handed alpha
Helix 19
AC1
B
102 105Right-handed 310
Helix 20
AC2
B
112 138Right-handed alpha
Helix 21
AC3
B
140 165Right-handed alpha
Helix 22
AC4
B
168 173Right-handed alpha
Helix 23
AC5
B
182 194Right-handed alpha
Helix 24
AC6
B
195 199Right-handed 310
Helix 25
AC7
B
201 210Right-handed alpha
Helix 26
AC8
B
230 248Right-handed alpha
Helix 27
AC9
B
249 264Right-handed alpha
Helix 28
AD1
B
265 267Right-handed 310
Helix 29
AD2
B
269 298Right-handed alpha
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There are 4 sheets in PDB entry 9MTY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
20 22anti-parallel
Strand 3
A
7 11anti-parallel
Strand 4
A
39 42parallel
Strand 5
A
59 62parallel
Strand 6
A
106 107anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 214first strand
Strand 2
A
217 218anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 28first strand
Strand 2
B
20 22anti-parallel
Strand 3
B
7 11anti-parallel
Strand 4
B
39 42parallel
Strand 5
B
60 62parallel
Strand 6
B
106 107anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
213 214first strand
Strand 2
B
217 218anti-parallel
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