Analysis of interatomic Contacts of Structural Units in PDB entry:
9MU3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MU3 entry

There are 6 chains in PDB entry 9MU3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2ASN 97
B
 THR 2ASN 97
C
 MET 1ASN 100
D
 MET 1PHE 127
E
 ALA 2ASP 163
F
 TYR 159LEU 170
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 9MU3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 11Right-handed alpha
Helix 2
AA2
A
18 37Right-handed alpha
Helix 3
AA3
A
45 47Right-handed 310
Helix 4
AA4
A
48 62Right-handed alpha
Helix 5
AA5
A
85 97Right-handed alpha
Helix 6
AA6
B
3 11Right-handed alpha
Helix 7
AA7
B
18 37Right-handed alpha
Helix 8
AA8
B
45 47Right-handed 310
Helix 9
AA9
B
48 63Right-handed alpha
Helix 10
AB1
B
85 97Right-handed alpha
Helix 11
AB2
D
2 16Right-handed alpha
Helix 12
AB3
D
70 86Right-handed alpha
Helix 13
AB4
E
6 8Right-handed 310
Helix 14
AB5
E
71 83Right-handed alpha
Helix 15
AB6
E
147 152Right-handed alpha
Helix 16
AB7
F
165 169Right-handed 310
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There are 8 sheets in PDB entry 9MU3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 73first strand
Strand 2
A
76 80anti-parallel
Strand 3
B
68 73anti-parallel
Strand 4
B
76 79anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 30first strand
Strand 2
C
5 13anti-parallel
Strand 3
C
72 75anti-parallel
Strand 4
C
78 87anti-parallel
Strand 5
C
91 98anti-parallel
Strand 6
C
57 63anti-parallel
Strand 7
C
34 38anti-parallel
Strand 8
C
5 13anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
44 48first strand
Strand 2
C
51 55anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
22 23first strand
Strand 2
D
36 44parallel
Strand 3
D
53 67anti-parallel
Strand 4
D
47 50anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
22 23first strand
Strand 2
D
36 44parallel
Strand 3
D
53 67anti-parallel
Strand 4
D
115 127anti-parallel
Strand 5
D
95 108anti-parallel
Strand 6
D
88 90anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
24 25first strand
Strand 2
E
10 16anti-parallel
Strand 3
E
85 96anti-parallel
Strand 4
E
105 120anti-parallel
Strand 5
E
128 135anti-parallel
Strand 6
E
56 65anti-parallel
Strand 7
E
29 38anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
24 25first strand
Strand 2
E
10 16anti-parallel
Strand 3
E
85 96anti-parallel
Strand 4
E
105 120anti-parallel
Strand 5
E
140 144anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
41 43first strand
Strand 2
E
50 52anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il