Analysis of interatomic Contacts of Structural Units in PDB entry:
9MU8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MU8 entry

There are 13 chains in PDB entry 9MU8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 7	ILE 1476
B	GLU 13	THR 1176
C	PRO 2	ASN 270
F	GLY 47	ASP 130
H	ALA 2	ALA 148
I	GLY 14	GLU 129
J	MET 1	LYS 67
K	MET 1	GLY 116
L	THR 12	ARG 57
R	A 37	A 46
T	T 1	T 50
N	A 11	A 60
E	MET 1	CYS 210

There are131 helices in PDB entry 9MU8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	23	31	Right-handed alpha
Helix 2	AA2	A	95	104	Right-handed alpha
Helix 3	AA3	A	119	129	Right-handed alpha
Helix 4	AA4	A	132	144	Right-handed alpha
Helix 5	AA5	A	209	219	Right-handed alpha
Helix 6	AA6	A	221	228	Right-handed alpha
Helix 7	AA7	A	236	239	Right-handed 310
Helix 8	AA8	A	266	288	Right-handed alpha
Helix 9	AA9	A	291	311	Right-handed alpha
Helix 10	AB1	A	330	336	Right-handed alpha
Helix 11	AB2	A	373	380	Right-handed alpha
Helix 12	AB3	A	390	401	Right-handed alpha
Helix 13	AB4	A	426	430	Right-handed 310
Helix 14	AB5	A	457	459	Right-handed 310
Helix 15	AB6	A	480	485	Right-handed alpha
Helix 16	AB7	A	500	510	Right-handed alpha
Helix 17	AB8	A	512	517	Right-handed 310
Helix 18	AB9	A	530	541	Right-handed alpha
Helix 19	AC1	A	548	556	Right-handed alpha
Helix 20	AC2	A	557	559	Right-handed 310
Helix 21	AC3	A	580	588	Right-handed alpha
Helix 22	AC4	A	643	653	Right-handed alpha
Helix 23	AC5	A	653	676	Right-handed alpha
Helix 24	AC6	A	680	685	Right-handed 310
Helix 25	AC7	A	687	714	Right-handed alpha
Helix 26	AC8	A	724	752	Right-handed alpha
Helix 27	AC9	A	756	764	Right-handed alpha
Helix 28	AD1	A	769	778	Right-handed alpha
Helix 29	AD2	A	808	813	Right-handed alpha
Helix 30	AD3	A	824	860	Right-handed alpha
Helix 31	AD4	A	882	886	Right-handed 310
Helix 32	AD5	A	904	913	Right-handed alpha
Helix 33	AD6	A	918	926	Right-handed alpha
Helix 34	AD7	A	927	937	Right-handed alpha
Helix 35	AD8	A	939	962	Right-handed alpha
Helix 36	AD9	A	974	986	Right-handed alpha
Helix 37	AE1	A	997	1012	Right-handed alpha
Helix 38	AE2	A	1019	1041	Right-handed alpha
Helix 39	AE3	A	1044	1049	Right-handed alpha
Helix 40	AE4	A	1053	1071	Right-handed alpha
Helix 41	AE5	A	1078	1089	Right-handed alpha
Helix 42	AE6	A	1090	1094	Right-handed 310
Helix 43	AE7	A	1112	1121	Right-handed alpha
Helix 44	AE8	A	1137	1142	Right-handed alpha
Helix 45	AE9	A	1142	1154	Right-handed alpha
Helix 46	AF1	A	1172	1176	Right-handed 310
Helix 47	AF2	A	1178	1189	Right-handed alpha
Helix 48	AF3	A	1209	1216	Right-handed alpha
Helix 49	AF4	A	1219	1232	Right-handed alpha
Helix 50	AF5	A	1272	1287	Right-handed alpha
Helix 51	AF6	A	1335	1340	Right-handed alpha
Helix 52	AF7	A	1353	1361	Right-handed alpha
Helix 53	AF8	A	1362	1381	Right-handed alpha
Helix 54	AF9	A	1386	1398	Right-handed alpha
Helix 55	AG1	A	1417	1423	Right-handed alpha
Helix 56	AG2	A	1426	1438	Right-handed alpha
Helix 57	AG3	A	1445	1453	Right-handed alpha
Helix 58	AG4	B	19	38	Right-handed alpha
Helix 59	AG5	B	41	63	Right-handed alpha
Helix 60	AG6	B	110	117	Right-handed alpha
Helix 61	AG7	B	168	175	Right-handed alpha
Helix 62	AG8	B	247	254	Right-handed alpha
Helix 63	AG9	B	270	277	Right-handed alpha
Helix 64	AH1	B	281	290	Right-handed alpha
Helix 65	AH2	B	295	302	Right-handed alpha
Helix 66	AH3	B	302	309	Right-handed alpha
Helix 67	AH4	B	314	324	Right-handed alpha
Helix 68	AH5	B	333	347	Right-handed alpha
Helix 69	AH6	B	358	378	Right-handed alpha
Helix 70	AH7	B	388	390	Right-handed 310
Helix 71	AH8	B	396	423	Right-handed alpha
Helix 72	AH9	B	431	436	Right-handed alpha
Helix 73	AI1	B	438	451	Right-handed alpha
Helix 74	AI2	B	459	463	Right-handed 310
Helix 75	AI3	B	475	483	Right-handed alpha
Helix 76	AI4	B	497	501	Right-handed 310
Helix 77	AI5	B	503	507	Right-handed 310
Helix 78	AI6	B	539	550	Right-handed alpha
Helix 79	AI7	B	558	562	Right-handed 310
Helix 80	AI8	B	580	595	Right-handed alpha
Helix 81	AI9	B	637	648	Right-handed alpha
Helix 82	AJ1	B	653	660	Right-handed alpha
Helix 83	AJ2	B	669	673	Right-handed 310
Helix 84	AJ3	B	679	683	Right-handed 310
Helix 85	AJ4	B	701	706	Right-handed 310
Helix 86	AJ5	B	715	719	Right-handed 310
Helix 87	AJ6	B	720	731	Right-handed alpha
Helix 88	AJ7	B	763	768	Right-handed 310
Helix 89	AJ8	B	800	806	Right-handed alpha
Helix 90	AJ9	B	846	850	Right-handed 310
Helix 91	AK1	B	883	887	Right-handed 310
Helix 92	AK2	B	952	956	Right-handed 310
Helix 93	AK3	B	971	974	Right-handed 310
Helix 94	AK4	B	979	996	Right-handed alpha
Helix 95	AK5	B	1009	1019	Right-handed alpha
Helix 96	AK6	B	1089	1100	Right-handed alpha
Helix 97	AK7	B	1101	1110	Right-handed alpha
Helix 98	AK8	B	1155	1166	Right-handed alpha
Helix 99	AK9	C	27	40	Right-handed alpha
Helix 100	AL1	C	60	70	Right-handed alpha
Helix 101	AL2	C	84	88	Right-handed 310
Helix 102	AL3	C	118	120	Right-handed 310
Helix 103	AL4	C	129	133	Right-handed 310
Helix 104	AL5	C	174	178	Right-handed 310
Helix 105	AL6	C	200	204	Right-handed 310
Helix 106	AL7	C	241	268	Right-handed alpha
Helix 107	AL8	F	50	54	Right-handed 310
Helix 108	AL9	F	61	78	Right-handed alpha
Helix 109	AM1	F	91	102	Right-handed alpha
Helix 110	AM2	H	83	88	Right-handed 310
Helix 111	AM3	H	129	131	Right-handed 310
Helix 112	AM4	I	67	72	Right-handed alpha
Helix 113	AM5	I	73	79	Right-handed 310
Helix 114	AM6	I	107	111	Right-handed 310
Helix 115	AM7	J	18	28	Right-handed alpha
Helix 116	AM8	J	30	39	Right-handed alpha
Helix 117	AM9	J	42	51	Right-handed alpha
Helix 118	AN1	J	55	60	Right-handed alpha
Helix 119	AN2	K	5	10	Right-handed 310
Helix 120	AN3	K	39	51	Right-handed alpha
Helix 121	AN4	K	82	116	Right-handed alpha
Helix 122	AN5	E	2	24	Right-handed alpha
Helix 123	AN6	E	29	34	Right-handed alpha
Helix 124	AN7	E	36	45	Right-handed alpha
Helix 125	AN8	E	83	98	Right-handed alpha
Helix 126	AN9	E	111	122	Right-handed alpha
Helix 127	AO1	E	133	137	Right-handed 310
Helix 128	AO2	E	138	142	Right-handed 310
Helix 129	AO3	E	152	163	Right-handed alpha
Helix 130	AO4	E	166	170	Right-handed 310
Helix 131	AO5	E	177	184	Right-handed alpha

There are 43 sheets in PDB entry 9MU8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1440	1441	first strand
Strand 2	A	16	18	anti-parallel
Strand 3	B	1172	1174	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	44	first strand
Strand 2	A	47	48	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	91	first strand
Strand 2	A	241	247	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	182	185	first strand
Strand 2	A	190	193	anti-parallel
Strand 3	A	205	208	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1062	1064	first strand
Strand 2	A	354	361	anti-parallel
Strand 3	A	492	496	anti-parallel
Strand 4	A	447	451	anti-parallel
Strand 5	A	461	468	anti-parallel
Strand 6	A	369	372	parallel
Strand 7	A	474	476	anti-parallel
Strand 8	A	354	361	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	381	385	first strand
Strand 2	A	437	441	anti-parallel
Strand 3	A	408	412	anti-parallel
Strand 4	A	418	420	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	546	547	first strand
Strand 2	A	578	579	anti-parallel

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There are 10 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	571	573	first strand
Strand 2	H	90	100	anti-parallel
Strand 3	H	139	146	anti-parallel
Strand 4	H	55	61	anti-parallel
Strand 5	H	4	15	anti-parallel
Strand 6	H	25	32	anti-parallel
Strand 7	H	38	44	anti-parallel
Strand 8	H	120	127	anti-parallel
Strand 9	H	110	117	anti-parallel
Strand 10	H	90	100	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	594	597	first strand
Strand 2	A	619	623	anti-parallel
Strand 3	A	626	629	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	781	782	first strand
Strand 2	A	814	815	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	864	865	first strand
Strand 2	A	871	872	anti-parallel
Strand 3	A	878	880	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	894	897	first strand
Strand 2	A	968	971	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1299	1302	first strand
Strand 2	A	1327	1331	anti-parallel
Strand 3	A	1130	1134	anti-parallel
Strand 4	A	1350	1351	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1156	1157	first strand
Strand 2	A	1289	1291	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1235	1239	first strand
Strand 2	A	1247	1253	anti-parallel
Strand 3	A	1202	1208	anti-parallel
Strand 4	A	1162	1169	anti-parallel
Strand 5	I	56	61	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1311	1314	first strand
Strand 2	A	1320	1323	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1463	1467	first strand
Strand 2	F	107	112	anti-parallel
Strand 3	F	118	122	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	67	first strand
Strand 2	B	84	94	anti-parallel
Strand 3	B	122	134	anti-parallel
Strand 4	B	141	154	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	100	first strand
Strand 2	B	106	108	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	186	188	first strand
Strand 2	B	191	195	anti-parallel
Strand 3	B	468	470	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	392	395	first strand
Strand 2	B	197	201	anti-parallel
Strand 3	B	485	487	parallel
Strand 4	B	524	526	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	207	210	first strand
Strand 2	B	216	224	anti-parallel
Strand 3	B	234	241	anti-parallel
Strand 4	B	257	260	anti-parallel
Strand 5	B	268	269	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	532	533	first strand
Strand 2	B	622	630	anti-parallel
Strand 3	B	663	667	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	633	634	first strand
Strand 2	B	622	630	anti-parallel
Strand 3	B	697	698	anti-parallel
Strand 4	B	676	677	parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	552	553	first strand
Strand 2	B	573	578	anti-parallel
Strand 3	B	566	570	anti-parallel
Strand 4	B	612	616	parallel
Strand 5	B	603	607	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	749	753	first strand
Strand 2	B	810	819	anti-parallel
Strand 3	B	919	929	anti-parallel
Strand 4	B	903	913	anti-parallel
Strand 5	B	861	863	anti-parallel

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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	749	753	first strand
Strand 2	B	810	819	anti-parallel
Strand 3	B	919	929	anti-parallel
Strand 4	B	903	913	anti-parallel
Strand 5	L	43	45	anti-parallel
Strand 6	L	14	18	anti-parallel
Strand 7	L	24	27	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	761	762	first strand
Strand 2	B	999	1000	parallel

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There are 8 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1027	1028	first strand
Strand 2	B	1043	1052	anti-parallel
Strand 3	B	936	938	anti-parallel
Strand 4	B	945	951	anti-parallel
Strand 5	B	796	799	parallel
Strand 6	B	967	969	anti-parallel
Strand 7	B	778	784	parallel
Strand 8	B	1043	1052	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	829	831	first strand
Strand 2	B	871	874	anti-parallel
Strand 3	B	891	893	anti-parallel
Strand 4	B	839	840	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	867	869	first strand
Strand 2	B	896	897	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	958	959	first strand
Strand 2	B	1030	1031	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1115	1121	first strand
Strand 2	B	1148	1154	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1129	1131	first strand
Strand 2	B	1136	1138	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	8	14	first strand
Strand 2	C	18	24	anti-parallel
Strand 3	C	229	236	anti-parallel
Strand 4	C	180	187	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	121	122	first strand
Strand 2	C	99	106	anti-parallel
Strand 3	C	159	170	anti-parallel
Strand 4	C	43	55	anti-parallel
Strand 5	L	53	55	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	113	116	first strand
Strand 2	C	150	154	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	28	33	first strand
Strand 2	I	38	43	anti-parallel
Strand 3	I	49	51	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	84	85	first strand
Strand 2	I	98	101	anti-parallel
Strand 3	I	115	118	anti-parallel
Strand 4	I	126	127	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	19	23	first strand
Strand 2	K	30	36	anti-parallel
Strand 3	K	70	77	anti-parallel
Strand 4	K	56	62	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	60	63	first strand
Strand 2	E	71	75	anti-parallel
Strand 3	E	101	106	parallel
Strand 4	E	126	131	parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	81	82	first strand
Strand 2	E	109	110	parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	147	150	first strand
Strand 2	E	190	197	anti-parallel
Strand 3	E	201	209	anti-parallel
Strand 4	E	171	173	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MU8

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MU8