Analysis of interatomic Contacts of Structural Units in PDB entry:
9MUE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MUE entry

There are 6 chains in PDB entry 9MUE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 2	GLY 258
a	A 0	A 3
b	A 4	A 7
B	PRO 2	GLY 258
C	PRO 2	GLY 258
D	PRO 2	GLY 258

There are 41 helices in PDB entry 9MUE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	11	Right-handed 310
Helix 2	AA2	A	12	25	Right-handed alpha
Helix 3	AA3	A	72	83	Right-handed alpha
Helix 4	AA4	A	96	100	Right-handed 310
Helix 5	AA5	A	106	119	Right-handed alpha
Helix 6	AA6	A	129	142	Right-handed alpha
Helix 7	AA7	A	177	182	Right-handed alpha
Helix 8	AA8	A	185	190	Right-handed 310
Helix 9	AA9	A	213	222	Right-handed alpha
Helix 10	AB1	A	223	225	Right-handed 310
Helix 11	AB2	B	9	11	Right-handed 310
Helix 12	AB3	B	12	25	Right-handed alpha
Helix 13	AB4	B	68	83	Right-handed alpha
Helix 14	AB5	B	96	100	Right-handed 310
Helix 15	AB6	B	106	120	Right-handed alpha
Helix 16	AB7	B	129	144	Right-handed alpha
Helix 17	AB8	B	177	182	Right-handed alpha
Helix 18	AB9	B	185	190	Right-handed 310
Helix 19	AC1	B	213	222	Right-handed alpha
Helix 20	AC2	B	223	225	Right-handed 310
Helix 21	AC3	C	12	25	Right-handed alpha
Helix 22	AC4	C	64	67	Right-handed 310
Helix 23	AC5	C	68	83	Right-handed alpha
Helix 24	AC6	C	96	100	Right-handed 310
Helix 25	AC7	C	106	120	Right-handed alpha
Helix 26	AC8	C	129	142	Right-handed alpha
Helix 27	AC9	C	177	182	Right-handed 310
Helix 28	AD1	C	185	190	Right-handed 310
Helix 29	AD2	C	213	222	Right-handed alpha
Helix 30	AD3	C	223	225	Right-handed 310
Helix 31	AD4	D	9	11	Right-handed 310
Helix 32	AD5	D	12	25	Right-handed alpha
Helix 33	AD6	D	44	48	Right-handed 310
Helix 34	AD7	D	68	83	Right-handed alpha
Helix 35	AD8	D	96	100	Right-handed 310
Helix 36	AD9	D	106	120	Right-handed alpha
Helix 37	AE1	D	129	143	Right-handed alpha
Helix 38	AE2	D	177	182	Right-handed 310
Helix 39	AE3	D	185	190	Right-handed 310
Helix 40	AE4	D	213	222	Right-handed alpha
Helix 41	AE5	D	223	225	Right-handed 310

There are 10 sheets in PDB entry 9MUE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	31	first strand
Strand 2	A	3	7	parallel
Strand 3	A	55	61	parallel
Strand 4	A	88	93	parallel
Strand 5	A	123	124	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	150	157	first strand
Strand 2	A	160	166	anti-parallel
Strand 3	A	206	209	parallel
Strand 4	A	230	234	parallel
Strand 5	A	239	242	anti-parallel
Strand 6	A	255	257	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	31	first strand
Strand 2	B	3	7	parallel
Strand 3	B	56	61	parallel
Strand 4	B	88	93	parallel
Strand 5	B	123	124	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	157	first strand
Strand 2	B	160	166	anti-parallel
Strand 3	B	206	209	parallel
Strand 4	B	230	234	parallel
Strand 5	B	239	242	anti-parallel
Strand 6	B	255	257	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	31	first strand
Strand 2	C	3	7	parallel
Strand 3	C	55	61	parallel
Strand 4	C	88	93	parallel
Strand 5	C	123	124	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	150	157	first strand
Strand 2	C	160	166	anti-parallel
Strand 3	C	206	209	parallel
Strand 4	C	230	234	parallel
Strand 5	C	239	242	anti-parallel
Strand 6	C	255	256	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	29	31	first strand
Strand 2	D	3	7	parallel
Strand 3	D	55	61	parallel
Strand 4	D	88	89	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	29	31	first strand
Strand 2	D	3	7	parallel
Strand 3	D	55	61	parallel
Strand 4	D	92	93	parallel
Strand 5	D	123	124	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	148	149	first strand
Strand 2	D	160	168	anti-parallel
Strand 3	D	153	157	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	148	149	first strand
Strand 2	D	160	168	anti-parallel
Strand 3	D	206	209	parallel
Strand 4	D	230	234	parallel
Strand 5	D	239	242	anti-parallel
Strand 6	D	255	257	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MUE

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MUE