Analysis of interatomic Contacts of Structural Units in PDB entry:
9MUI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MUI entry

There are 4 chains in PDB entry 9MUI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 616	ASN 742
B	PRO 616	ASN 742
C	PRO 616	ASN 742
D	PRO 616	ASN 742

There are 4 helices in PDB entry 9MUI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	661	663	Right-handed 310
Helix 2	AA2	B	661	663	Right-handed 310
Helix 3	AA3	C	661	663	Right-handed 310
Helix 4	AA4	D	661	663	Right-handed 310

There are 10 sheets in PDB entry 9MUI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	618	620	first strand
Strand 2	A	731	741	anti-parallel
Strand 3	A	648	650	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	618	620	first strand
Strand 2	A	731	741	anti-parallel
Strand 3	A	668	676	anti-parallel
Strand 4	A	705	712	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	653	659	first strand
Strand 2	A	720	727	anti-parallel
Strand 3	A	684	689	anti-parallel
Strand 4	A	693	698	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	618	620	first strand
Strand 2	B	720	741	anti-parallel
Strand 3	B	684	689	anti-parallel
Strand 4	B	693	698	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	648	659	first strand
Strand 2	B	720	741	anti-parallel
Strand 3	B	668	676	anti-parallel
Strand 4	B	705	712	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	618	620	first strand
Strand 2	C	720	741	anti-parallel
Strand 3	C	684	689	anti-parallel
Strand 4	C	693	698	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	648	659	first strand
Strand 2	C	720	741	anti-parallel
Strand 3	C	668	676	anti-parallel
Strand 4	C	705	712	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	618	620	first strand
Strand 2	D	731	741	anti-parallel
Strand 3	D	648	650	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	618	620	first strand
Strand 2	D	731	741	anti-parallel
Strand 3	D	668	676	anti-parallel
Strand 4	D	705	712	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	653	659	first strand
Strand 2	D	720	727	anti-parallel
Strand 3	D	684	689	anti-parallel
Strand 4	D	693	698	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MUI

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MUI