Analysis of interatomic Contacts of Structural Units in PDB entry:
9MUU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MUU entry

There are 6 chains in PDB entry 9MUU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 LYS 3LEU 64
C
 VAL 66LYS 238
D
 LYS 3LEU 64
D
 VAL 66LYS 238
E
 LYS 3LEU 64
E
 VAL 66LYS 238
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 9MUU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
3 9Right-handed 310
Helix 2
AA2
C
56 61Right-handed 310
Helix 3
AA3
C
66 70Right-handed 310
Helix 4
AA4
C
73 79Right-handed 310
Helix 5
AA5
C
80 85Right-handed alpha
Helix 6
AA6
C
232 238Right-handed 310
Helix 7
AA7
D
3 9Right-handed 310
Helix 8
AA8
D
56 61Right-handed 310
Helix 9
AA9
D
66 70Right-handed 310
Helix 10
AB1
D
73 79Right-handed 310
Helix 11
AB2
D
80 85Right-handed alpha
Helix 12
AB3
D
232 238Right-handed 310
Helix 13
AB4
E
3 9Right-handed 310
Helix 14
AB5
E
56 61Right-handed 310
Helix 15
AB6
E
66 70Right-handed 310
Helix 16
AB7
E
80 85Right-handed alpha
Helix 17
AB8
E
232 238Right-handed 310
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There are 3 sheets in PDB entry 9MUU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
144 146first strand
Strand 2
C
201 207anti-parallel
Strand 3
C
216 224anti-parallel
Strand 4
C
41 48anti-parallel
Strand 5
C
25 36anti-parallel
Strand 6
C
11 22anti-parallel
Strand 7
C
116 126parallel
Strand 8
C
103 113anti-parallel
Strand 9
C
90 98anti-parallel
Strand 10
C
175 186anti-parallel
Strand 11
C
159 169anti-parallel
Strand 12
C
150 154anti-parallel
Strand 13
C
198 199anti-parallel
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There are 13 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
144 146first strand
Strand 2
D
198 207anti-parallel
Strand 3
D
216 226anti-parallel
Strand 4
D
41 48anti-parallel
Strand 5
D
25 36anti-parallel
Strand 6
D
11 22anti-parallel
Strand 7
D
116 126parallel
Strand 8
D
103 113anti-parallel
Strand 9
D
90 98anti-parallel
Strand 10
D
175 186anti-parallel
Strand 11
D
160 169anti-parallel
Strand 12
D
150 153anti-parallel
Strand 13
D
198 207anti-parallel
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There are 12 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
11 22first strand
Strand 2
E
25 36anti-parallel
Strand 3
E
41 48anti-parallel
Strand 4
E
216 224anti-parallel
Strand 5
E
198 207anti-parallel
Strand 6
E
144 154anti-parallel
Strand 7
E
159 169anti-parallel
Strand 8
E
175 186anti-parallel
Strand 9
E
90 98anti-parallel
Strand 10
E
103 113anti-parallel
Strand 11
E
116 126anti-parallel
Strand 12
E
11 22parallel
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