Analysis of interatomic Contacts of Structural Units in PDB entry:
9MVG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MVG entry

There are 6 chains in PDB entry 9MVG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 145
B
 MET 1ASP 145
C
 ALA 16GLN 55
D
 ASP 2ASP 145
E
 ASP 2PRO 144
F
 ALA 16ILE 56
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 9MVG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
50 65Right-handed alpha
Helix 2
AA2
A
128 142Right-handed alpha
Helix 3
AA3
B
50 64Right-handed alpha
Helix 4
AA4
B
128 142Right-handed alpha
Helix 5
AA5
C
18 33Right-handed alpha
Helix 6
AA6
C
41 54Right-handed alpha
Helix 7
AA7
D
50 65Right-handed alpha
Helix 8
AA8
D
128 141Right-handed alpha
Helix 9
AA9
E
50 66Right-handed alpha
Helix 10
AB1
E
128 141Right-handed alpha
Helix 11
AB2
F
18 32Right-handed alpha
Helix 12
AB3
F
41 53Right-handed alpha
Helix 13
AB4
F
54 56Right-handed 310
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There are 9 sheets in PDB entry 9MVG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 7first strand
Strand 2
A
10 13anti-parallel
Strand 3
B
143 144anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 20first strand
Strand 2
B
24 27anti-parallel
Strand 3
B
37 44anti-parallel
Strand 4
B
115 123anti-parallel
Strand 5
B
100 112anti-parallel
Strand 6
B
86 97anti-parallel
Strand 7
B
70 79anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 79first strand
Strand 2
A
86 97anti-parallel
Strand 3
A
100 112anti-parallel
Strand 4
A
115 123anti-parallel
Strand 5
A
37 44anti-parallel
Strand 6
A
24 27anti-parallel
Strand 7
B
19 20anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 144first strand
Strand 2
B
10 15anti-parallel
Strand 3
B
2 7anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
5 7first strand
Strand 2
D
10 12anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
19 20first strand
Strand 2
E
24 27anti-parallel
Strand 3
E
37 44anti-parallel
Strand 4
E
115 124anti-parallel
Strand 5
E
100 112anti-parallel
Strand 6
E
87 97anti-parallel
Strand 7
E
70 71anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
19 20first strand
Strand 2
E
24 27anti-parallel
Strand 3
E
37 44anti-parallel
Strand 4
E
115 124anti-parallel
Strand 5
E
100 112anti-parallel
Strand 6
E
87 97anti-parallel
Strand 7
E
77 78anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
70 79first strand
Strand 2
D
86 97anti-parallel
Strand 3
D
100 112anti-parallel
Strand 4
D
115 123anti-parallel
Strand 5
D
37 44anti-parallel
Strand 6
D
24 27anti-parallel
Strand 7
E
19 20anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 7first strand
Strand 2
E
10 14anti-parallel
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