Analysis of interatomic Contacts of Structural Units in PDB entry:
9MVS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MVS entry

There are 4 chains in PDB entry 9MVS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LYS 2GLY 76
A
 MET 1GLU 1153
C
 A 2 C 53
D
 G 7 A 29
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 9MVS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
14 33Right-handed alpha
Helix 2
AA2
B
48 76Right-handed alpha
Helix 3
AA3
A
29 38Right-handed alpha
Helix 4
AA4
A
43 45Right-handed 310
Helix 5
AA5
A
54 69Right-handed alpha
Helix 6
AA6
A
106 119Right-handed alpha
Helix 7
AA7
A
123 150Right-handed alpha
Helix 8
AA8
A
170 179Right-handed alpha
Helix 9
AA9
A
184 200Right-handed alpha
Helix 10
AB1
A
201 214Right-handed alpha
Helix 11
AB2
A
219 232Right-handed alpha
Helix 12
AB3
A
232 239Right-handed alpha
Helix 13
AB4
A
240 251Right-handed alpha
Helix 14
AB5
A
253 261Right-handed alpha
Helix 15
AB6
A
265 277Right-handed alpha
Helix 16
AB7
A
284 289Right-handed alpha
Helix 17
AB8
A
290 308Right-handed alpha
Helix 18
AB9
A
318 323Right-handed alpha
Helix 19
AC1
A
325 355Right-handed alpha
Helix 20
AC2
A
362 377Right-handed alpha
Helix 21
AC3
A
379 394Right-handed alpha
Helix 22
AC4
A
423 432Right-handed alpha
Helix 23
AC5
A
433 445Right-handed alpha
Helix 24
AC6
A
453 476Right-handed alpha
Helix 25
AC7
A
483 487Right-handed 310
Helix 26
AC8
A
496 507Right-handed alpha
Helix 27
AC9
A
508 523Right-handed alpha
Helix 28
AD1
A
530 541Right-handed alpha
Helix 29
AD2
A
555 570Right-handed alpha
Helix 30
AD3
A
581 602Right-handed alpha
Helix 31
AD4
A
602 609Right-handed alpha
Helix 32
AD5
A
614 629Right-handed alpha
Helix 33
AD6
A
651 666Right-handed alpha
Helix 34
AD7
A
676 697Right-handed alpha
Helix 35
AD8
A
698 704Right-handed 310
Helix 36
AD9
A
707 714Right-handed alpha
Helix 37
AE1
A
716 732Right-handed alpha
Helix 38
AE2
A
737 747Right-handed alpha
Helix 39
AE3
A
756 769Right-handed alpha
Helix 40
AE4
A
770 788Right-handed alpha
Helix 41
AE5
A
793 805Right-handed alpha
Helix 42
AE6
A
817 823Right-handed alpha
Helix 43
AE7
A
834 842Right-handed alpha
Helix 44
AE8
A
856 866Right-handed alpha
Helix 45
AE9
A
867 879Right-handed alpha
Helix 46
AF1
A
883 913Right-handed alpha
Helix 47
AF2
A
921 947Right-handed alpha
Helix 48
AF3
A
947 983Right-handed alpha
Helix 49
AF4
A
987 994Right-handed alpha
Helix 50
AF5
A
1007 1020Right-handed alpha
Helix 51
AF6
A
1023 1030Right-handed alpha
Helix 52
AF7
A
1031 1042Right-handed alpha
Helix 53
AF8
A
1045 1053Right-handed alpha
Helix 54
AF9
A
1063 1075Right-handed alpha
Helix 55
AG1
A
1078 1083Right-handed alpha
Helix 56
AG2
A
1084 1096Right-handed alpha
Helix 57
AG3
A
1137 1150Right-handed alpha
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There are 7 sheets in PDB entry 9MVS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 10first strand
Strand 2
B
35 42parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 13first strand
Strand 2
A
18 22anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 41first strand
Strand 2
A
72 76anti-parallel
Strand 3
A
79 83anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 158first strand
Strand 2
A
165 168anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 411first strand
Strand 2
A
419 421anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1098 1103first strand
Strand 2
A
1111 1117anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1119 1122first strand
Strand 2
A
1131 1134anti-parallel
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