Analysis of interatomic Contacts of Structural Units in PDB entry:
9MVV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MVV entry

There are 2 chains in PDB entry 9MVV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 2038	ASP 3122
C	PHE 31	ALA 428

There are 21 helices in PDB entry 9MVV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2135	2139	Right-handed alpha
Helix 2	AA2	A	2212	2216	Right-handed 310
Helix 3	AA3	A	2266	2270	Right-handed 310
Helix 4	AA4	A	2286	2290	Right-handed 310
Helix 5	AA5	A	2300	2309	Right-handed alpha
Helix 6	AA6	A	2312	2317	Right-handed alpha
Helix 7	AA7	A	2401	2413	Right-handed alpha
Helix 8	AA8	A	2457	2462	Right-handed 310
Helix 9	AA9	A	2500	2507	Right-handed alpha
Helix 10	AB1	A	2535	2545	Right-handed alpha
Helix 11	AB2	A	2548	2561	Right-handed alpha
Helix 12	AB3	A	2587	2591	Right-handed alpha
Helix 13	AB4	A	2750	2755	Right-handed 310
Helix 14	AB5	A	2759	2764	Right-handed alpha
Helix 15	AB6	A	2815	2821	Right-handed alpha
Helix 16	AB7	A	2904	2906	Right-handed 310
Helix 17	AB8	A	2912	2914	Right-handed 310
Helix 18	AB9	A	3051	3055	Right-handed alpha
Helix 19	AC1	C	109	113	Right-handed 310
Helix 20	AC2	C	208	210	Right-handed 310
Helix 21	AC3	C	372	377	Right-handed alpha

There are 28 sheets in PDB entry 9MVV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2044	2046	first strand
Strand 2	A	2073	2078	parallel
Strand 3	A	2188	2196	parallel
Strand 4	A	2171	2178	anti-parallel
Strand 5	A	2109	2110	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2048	2050	first strand
Strand 2	A	2053	2057	anti-parallel
Strand 3	A	2083	2089	parallel
Strand 4	A	2155	2162	anti-parallel
Strand 5	A	2146	2152	anti-parallel
Strand 6	A	2514	2518	anti-parallel
Strand 7	A	2521	2525	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2124	2126	first strand
Strand 2	A	2132	2134	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2205	2209	first strand
Strand 2	A	2238	2242	parallel
Strand 3	A	2337	2341	anti-parallel
Strand 4	A	2320	2322	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2248	2250	first strand
Strand 2	A	2349	2358	anti-parallel
Strand 3	A	2259	2264	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2248	2250	first strand
Strand 2	A	2349	2358	anti-parallel
Strand 3	A	2363	2370	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2385	2389	first strand
Strand 2	A	2471	2480	parallel
Strand 3	A	2653	2660	parallel
Strand 4	A	2632	2640	anti-parallel
Strand 5	A	2566	2569	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2385	2389	first strand
Strand 2	A	2471	2480	parallel
Strand 3	A	2653	2660	parallel
Strand 4	A	2632	2640	anti-parallel
Strand 5	A	2577	2580	anti-parallel
Strand 6	A	2584	2586	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2393	2395	first strand
Strand 2	A	2449	2453	anti-parallel
Strand 3	A	2485	2489	parallel
Strand 4	A	2619	2623	anti-parallel
Strand 5	A	2595	2596	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2599	2600	first strand
Strand 2	A	2609	2610	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2668	2671	first strand
Strand 2	A	2714	2719	parallel
Strand 3	A	2781	2785	anti-parallel
Strand 4	A	2768	2770	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2705	2707	first strand
Strand 2	A	2808	2811	parallel
Strand 3	A	2799	2804	anti-parallel
Strand 4	A	2735	2737	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2836	2838	first strand
Strand 2	A	2843	2847	anti-parallel
Strand 3	A	2874	2880	parallel
Strand 4	A	2930	2936	anti-parallel
Strand 5	A	2919	2925	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2862	2869	first strand
Strand 2	A	2969	2976	parallel
Strand 3	A	2945	2952	anti-parallel
Strand 4	A	2891	2893	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2900	2903	first strand
Strand 2	A	2907	2910	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2957	2960	first strand
Strand 2	A	2963	2966	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2996	2998	first strand
Strand 2	A	2983	2987	parallel
Strand 3	A	3018	3025	parallel
Strand 4	A	3070	3077	anti-parallel
Strand 5	A	3058	3063	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3008	3014	first strand
Strand 2	A	3096	3103	parallel
Strand 3	A	3084	3091	anti-parallel
Strand 4	A	3029	3031	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3008	3014	first strand
Strand 2	A	3096	3103	parallel
Strand 3	A	3084	3091	anti-parallel
Strand 4	A	3038	3041	anti-parallel
Strand 5	A	3047	3050	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3117	3121	first strand
Strand 2	C	68	75	anti-parallel
Strand 3	C	173	179	parallel
Strand 4	C	152	159	anti-parallel
Strand 5	C	96	98	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	80	86	first strand
Strand 2	C	138	144	anti-parallel
Strand 3	C	127	131	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	105	106	first strand
Strand 2	C	116	117	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	165	first strand
Strand 2	C	168	169	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	186	190	first strand
Strand 2	C	222	226	parallel
Strand 3	C	257	259	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	212	217	first strand
Strand 2	C	283	288	parallel
Strand 3	C	271	273	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	325	331	first strand
Strand 2	C	419	425	parallel
Strand 3	C	406	411	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	336	342	first strand
Strand 2	C	394	400	anti-parallel
Strand 3	C	381	385	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	355	357	first strand
Strand 2	C	369	371	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MVV

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MVV