Analysis of interatomic Contacts of Structural Units in PDB entry:
9MVZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MVZ entry

There are 9 chains in PDB entry 9MVZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	ALA 20	PRO 957
G	ALA 2	GLU 82
C	LEU 2	ALA 138
E	ALA 20	PRO 957
F	ALA 20	PRO 957
H	ALA 2	GLU 82
I	ALA 2	GLU 82
A	LEU 2	ALA 138
B	LEU 2	ALA 138

There are138 helices in PDB entry 9MVZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	24	33	Right-handed alpha
Helix 2	AA2	D	33	52	Right-handed alpha
Helix 3	AA3	D	54	62	Right-handed alpha
Helix 4	AA4	D	71	84	Right-handed alpha
Helix 5	AA5	D	104	121	Right-handed alpha
Helix 6	AA6	D	137	142	Right-handed alpha
Helix 7	AA7	D	161	177	Right-handed alpha
Helix 8	AA8	D	190	205	Right-handed alpha
Helix 9	AA9	D	205	226	Right-handed alpha
Helix 10	AB1	D	227	255	Right-handed alpha
Helix 11	AB2	D	261	294	Right-handed alpha
Helix 12	AB3	D	296	325	Right-handed alpha
Helix 13	AB4	D	326	329	Right-handed 310
Helix 14	AB5	D	331	336	Right-handed alpha
Helix 15	AB6	D	337	366	Right-handed alpha
Helix 16	AB7	D	378	391	Right-handed alpha
Helix 17	AB8	D	391	405	Right-handed alpha
Helix 18	AB9	D	406	410	Right-handed 310
Helix 19	AC1	D	418	423	Right-handed 310
Helix 20	AC2	D	427	440	Right-handed alpha
Helix 21	AC3	D	441	446	Right-handed 310
Helix 22	AC4	D	460	476	Right-handed alpha
Helix 23	AC5	D	498	505	Right-handed alpha
Helix 24	AC6	D	507	513	Right-handed alpha
Helix 25	AC7	D	513	576	Right-handed alpha
Helix 26	AC8	D	580	590	Right-handed alpha
Helix 27	AC9	D	598	673	Right-handed alpha
Helix 28	AD1	D	676	685	Right-handed alpha
Helix 29	AD2	D	694	699	Right-handed 310
Helix 30	AD3	D	700	711	Right-handed alpha
Helix 31	AD4	D	730	749	Right-handed alpha
Helix 32	AD5	D	763	798	Right-handed alpha
Helix 33	AD6	D	799	827	Right-handed alpha
Helix 34	AD7	D	836	864	Right-handed alpha
Helix 35	AD8	D	867	896	Right-handed alpha
Helix 36	AD9	D	897	900	Right-handed 310
Helix 37	AE1	D	902	923	Right-handed alpha
Helix 38	AE2	D	926	936	Right-handed alpha
Helix 39	AE3	D	937	941	Right-handed 310
Helix 40	AE4	G	4	20	Right-handed alpha
Helix 41	AE5	G	23	27	Right-handed 310
Helix 42	AE6	G	40	56	Right-handed alpha
Helix 43	AE7	G	60	67	Right-handed alpha
Helix 44	AE8	G	69	82	Right-handed alpha
Helix 45	AE9	C	5	27	Right-handed alpha
Helix 46	AF1	E	24	33	Right-handed alpha
Helix 47	AF2	E	33	52	Right-handed alpha
Helix 48	AF3	E	54	62	Right-handed alpha
Helix 49	AF4	E	71	84	Right-handed alpha
Helix 50	AF5	E	104	121	Right-handed alpha
Helix 51	AF6	E	137	142	Right-handed alpha
Helix 52	AF7	E	161	177	Right-handed alpha
Helix 53	AF8	E	190	205	Right-handed alpha
Helix 54	AF9	E	205	226	Right-handed alpha
Helix 55	AG1	E	227	255	Right-handed alpha
Helix 56	AG2	E	261	294	Right-handed alpha
Helix 57	AG3	E	296	325	Right-handed alpha
Helix 58	AG4	E	326	329	Right-handed 310
Helix 59	AG5	E	331	336	Right-handed alpha
Helix 60	AG6	E	337	366	Right-handed alpha
Helix 61	AG7	E	378	391	Right-handed alpha
Helix 62	AG8	E	391	405	Right-handed alpha
Helix 63	AG9	E	406	413	Right-handed 310
Helix 64	AH1	E	418	423	Right-handed 310
Helix 65	AH2	E	427	440	Right-handed alpha
Helix 66	AH3	E	441	446	Right-handed 310
Helix 67	AH4	E	460	476	Right-handed alpha
Helix 68	AH5	E	498	505	Right-handed alpha
Helix 69	AH6	E	507	513	Right-handed alpha
Helix 70	AH7	E	513	576	Right-handed alpha
Helix 71	AH8	E	580	590	Right-handed alpha
Helix 72	AH9	E	598	673	Right-handed alpha
Helix 73	AI1	E	676	685	Right-handed alpha
Helix 74	AI2	E	694	699	Right-handed 310
Helix 75	AI3	E	700	711	Right-handed alpha
Helix 76	AI4	E	730	735	Right-handed alpha
Helix 77	AI5	E	736	749	Right-handed alpha
Helix 78	AI6	E	763	798	Right-handed alpha
Helix 79	AI7	E	799	827	Right-handed alpha
Helix 80	AI8	E	836	864	Right-handed alpha
Helix 81	AI9	E	867	896	Right-handed alpha
Helix 82	AJ1	E	897	900	Right-handed 310
Helix 83	AJ2	E	902	923	Right-handed alpha
Helix 84	AJ3	E	926	936	Right-handed alpha
Helix 85	AJ4	E	937	941	Right-handed 310
Helix 86	AJ5	F	24	33	Right-handed alpha
Helix 87	AJ6	F	33	52	Right-handed alpha
Helix 88	AJ7	F	54	62	Right-handed alpha
Helix 89	AJ8	F	71	84	Right-handed alpha
Helix 90	AJ9	F	104	121	Right-handed alpha
Helix 91	AK1	F	137	142	Right-handed alpha
Helix 92	AK2	F	161	177	Right-handed alpha
Helix 93	AK3	F	190	205	Right-handed alpha
Helix 94	AK4	F	205	226	Right-handed alpha
Helix 95	AK5	F	227	255	Right-handed alpha
Helix 96	AK6	F	261	294	Right-handed alpha
Helix 97	AK7	F	296	325	Right-handed alpha
Helix 98	AK8	F	326	329	Right-handed 310
Helix 99	AK9	F	331	336	Right-handed alpha
Helix 100	AL1	F	337	366	Right-handed alpha
Helix 101	AL2	F	378	391	Right-handed alpha
Helix 102	AL3	F	391	405	Right-handed alpha
Helix 103	AL4	F	406	410	Right-handed 310
Helix 104	AL5	F	418	423	Right-handed 310
Helix 105	AL6	F	427	438	Right-handed alpha
Helix 106	AL7	F	441	446	Right-handed 310
Helix 107	AL8	F	460	476	Right-handed alpha
Helix 108	AL9	F	498	505	Right-handed alpha
Helix 109	AM1	F	507	513	Right-handed alpha
Helix 110	AM2	F	513	576	Right-handed alpha
Helix 111	AM3	F	580	590	Right-handed alpha
Helix 112	AM4	F	598	640	Right-handed alpha
Helix 113	AM5	F	640	673	Right-handed alpha
Helix 114	AM6	F	676	685	Right-handed alpha
Helix 115	AM7	F	694	699	Right-handed 310
Helix 116	AM8	F	700	711	Right-handed alpha
Helix 117	AM9	F	730	735	Right-handed alpha
Helix 118	AN1	F	736	749	Right-handed alpha
Helix 119	AN2	F	763	798	Right-handed alpha
Helix 120	AN3	F	799	827	Right-handed alpha
Helix 121	AN4	F	836	864	Right-handed alpha
Helix 122	AN5	F	867	896	Right-handed alpha
Helix 123	AN6	F	897	900	Right-handed 310
Helix 124	AN7	F	902	923	Right-handed alpha
Helix 125	AN8	F	926	936	Right-handed alpha
Helix 126	AN9	F	937	941	Right-handed 310
Helix 127	AO1	H	4	20	Right-handed alpha
Helix 128	AO2	H	23	27	Right-handed 310
Helix 129	AO3	H	40	56	Right-handed alpha
Helix 130	AO4	H	60	67	Right-handed alpha
Helix 131	AO5	H	69	82	Right-handed alpha
Helix 132	AO6	I	4	21	Right-handed alpha
Helix 133	AO7	I	23	27	Right-handed 310
Helix 134	AO8	I	40	56	Right-handed alpha
Helix 135	AO9	I	60	67	Right-handed alpha
Helix 136	AP1	I	69	82	Right-handed alpha
Helix 137	AP2	A	5	29	Right-handed alpha
Helix 138	AP3	B	5	29	Right-handed alpha

There are 12 sheets in PDB entry 9MVZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	125	129	first strand
Strand 2	D	148	155	anti-parallel
Strand 3	D	91	99	anti-parallel
Strand 4	D	184	189	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	480	484	first strand
Strand 2	D	717	724	anti-parallel
Strand 3	D	448	453	anti-parallel
Strand 4	D	757	762	anti-parallel
Strand 5	A	35	36	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	36	first strand
Strand 2	F	757	762	anti-parallel
Strand 3	F	448	453	anti-parallel
Strand 4	F	717	724	anti-parallel
Strand 5	F	480	484	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	90	first strand
Strand 2	C	50	58	anti-parallel
Strand 3	C	107	114	anti-parallel
Strand 4	C	118	125	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	74	81	first strand
Strand 2	C	62	68	anti-parallel
Strand 3	C	98	103	anti-parallel
Strand 4	C	130	134	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	125	129	first strand
Strand 2	E	148	155	anti-parallel
Strand 3	E	91	99	anti-parallel
Strand 4	E	184	189	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	480	484	first strand
Strand 2	E	717	724	anti-parallel
Strand 3	E	448	453	anti-parallel
Strand 4	E	757	762	anti-parallel
Strand 5	B	35	36	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	125	129	first strand
Strand 2	F	148	155	anti-parallel
Strand 3	F	91	99	anti-parallel
Strand 4	F	184	189	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	90	first strand
Strand 2	A	50	58	anti-parallel
Strand 3	A	107	114	anti-parallel
Strand 4	A	118	125	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	74	81	first strand
Strand 2	A	62	68	anti-parallel
Strand 3	A	98	103	anti-parallel
Strand 4	A	130	134	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	90	first strand
Strand 2	B	50	58	anti-parallel
Strand 3	B	107	114	anti-parallel
Strand 4	B	117	125	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	74	81	first strand
Strand 2	B	62	68	anti-parallel
Strand 3	B	98	103	anti-parallel
Strand 4	B	130	134	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MVZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MVZ