Analysis of interatomic Contacts of Structural Units in PDB entry:
9MW0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MW0 entry

There are 6 chains in PDB entry 9MW0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
PRO 22PRO 957
G
ALA 3GLU 81
E
PRO 22PRO 957
F
PRO 22PRO 957
H
ALA 3GLU 81
I
ALA 3GLU 81
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are115 helices in PDB entry 9MW0. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
D
24 33Right-handed alpha
Helix 2
AA2
D
33 52Right-handed alpha
Helix 3
AA3
D
54 62Right-handed alpha
Helix 4
AA4
D
71 84Right-handed alpha
Helix 5
AA5
D
104 121Right-handed alpha
Helix 6
AA6
D
137 142Right-handed alpha
Helix 7
AA7
D
161 178Right-handed alpha
Helix 8
AA8
D
190 226Right-handed alpha
Helix 9
AA9
D
228 255Right-handed alpha
Helix 10
AB1
D
261 294Right-handed alpha
Helix 11
AB2
D
296 325Right-handed alpha
Helix 12
AB3
D
326 329Right-handed 310
Helix 13
AB4
D
331 366Right-handed alpha
Helix 14
AB5
D
378 391Right-handed alpha
Helix 15
AB6
D
391 405Right-handed alpha
Helix 16
AB7
D
406 410Right-handed 310
Helix 17
AB8
D
418 423Right-handed 310
Helix 18
AB9
D
427 440Right-handed alpha
Helix 19
AC1
D
441 446Right-handed alpha
Helix 20
AC2
D
460 476Right-handed alpha
Helix 21
AC3
D
498 503Right-handed alpha
Helix 22
AC4
D
657 685Right-handed alpha
Helix 23
AC5
D
694 699Right-handed 310
Helix 24
AC6
D
700 711Right-handed alpha
Helix 25
AC7
D
730 749Right-handed alpha
Helix 26
AC8
D
763 798Right-handed alpha
Helix 27
AC9
D
799 827Right-handed alpha
Helix 28
AD1
D
836 864Right-handed alpha
Helix 29
AD2
D
867 896Right-handed alpha
Helix 30
AD3
D
897 900Right-handed 310
Helix 31
AD4
D
902 923Right-handed alpha
Helix 32
AD5
D
926 936Right-handed alpha
Helix 33
AD6
D
937 941Right-handed 310
Helix 34
AD7
G
4 20Right-handed alpha
Helix 35
AD8
G
23 27Right-handed 310
Helix 36
AD9
G
40 56Right-handed alpha
Helix 37
AE1
G
60 67Right-handed alpha
Helix 38
AE2
G
69 81Right-handed alpha
Helix 39
AE3
E
24 33Right-handed alpha
Helix 40
AE4
E
33 52Right-handed alpha
Helix 41
AE5
E
54 62Right-handed alpha
Helix 42
AE6
E
71 84Right-handed alpha
Helix 43
AE7
E
104 121Right-handed alpha
Helix 44
AE8
E
137 142Right-handed alpha
Helix 45
AE9
E
161 178Right-handed alpha
Helix 46
AF1
E
190 226Right-handed alpha
Helix 47
AF2
E
228 255Right-handed alpha
Helix 48
AF3
E
261 294Right-handed alpha
Helix 49
AF4
E
296 325Right-handed alpha
Helix 50
AF5
E
326 329Right-handed 310
Helix 51
AF6
E
331 366Right-handed alpha
Helix 52
AF7
E
378 391Right-handed alpha
Helix 53
AF8
E
391 405Right-handed alpha
Helix 54
AF9
E
406 410Right-handed 310
Helix 55
AG1
E
418 423Right-handed 310
Helix 56
AG2
E
427 440Right-handed alpha
Helix 57
AG3
E
441 446Right-handed alpha
Helix 58
AG4
E
460 476Right-handed alpha
Helix 59
AG5
E
498 503Right-handed alpha
Helix 60
AG6
E
657 685Right-handed alpha
Helix 61
AG7
E
694 699Right-handed 310
Helix 62
AG8
E
700 708Right-handed alpha
Helix 63
AG9
E
730 749Right-handed alpha
Helix 64
AH1
E
763 798Right-handed alpha
Helix 65
AH2
E
799 827Right-handed alpha
Helix 66
AH3
E
836 864Right-handed alpha
Helix 67
AH4
E
867 896Right-handed alpha
Helix 68
AH5
E
897 900Right-handed 310
Helix 69
AH6
E
902 923Right-handed alpha
Helix 70
AH7
E
926 936Right-handed alpha
Helix 71
AH8
E
937 941Right-handed 310
Helix 72
AH9
F
24 33Right-handed alpha
Helix 73
AI1
F
33 52Right-handed alpha
Helix 74
AI2
F
54 62Right-handed alpha
Helix 75
AI3
F
71 84Right-handed alpha
Helix 76
AI4
F
104 121Right-handed alpha
Helix 77
AI5
F
137 142Right-handed alpha
Helix 78
AI6
F
161 178Right-handed alpha
Helix 79
AI7
F
190 226Right-handed alpha
Helix 80
AI8
F
228 255Right-handed alpha
Helix 81
AI9
F
261 294Right-handed alpha
Helix 82
AJ1
F
296 325Right-handed alpha
Helix 83
AJ2
F
326 329Right-handed 310
Helix 84
AJ3
F
331 366Right-handed alpha
Helix 85
AJ4
F
378 391Right-handed alpha
Helix 86
AJ5
F
391 405Right-handed alpha
Helix 87
AJ6
F
406 410Right-handed 310
Helix 88
AJ7
F
418 423Right-handed 310
Helix 89
AJ8
F
427 440Right-handed alpha
Helix 90
AJ9
F
441 446Right-handed alpha
Helix 91
AK1
F
460 476Right-handed alpha
Helix 92
AK2
F
498 503Right-handed alpha
Helix 93
AK3
F
657 685Right-handed alpha
Helix 94
AK4
F
694 700Right-handed alpha
Helix 95
AK5
F
700 708Right-handed alpha
Helix 96
AK6
F
730 749Right-handed alpha
Helix 97
AK7
F
763 798Right-handed alpha
Helix 98
AK8
F
799 827Right-handed alpha
Helix 99
AK9
F
836 863Right-handed alpha
Helix 100
AL1
F
864 866Right-handed 310
Helix 101
AL2
F
867 896Right-handed alpha
Helix 102
AL3
F
897 900Right-handed 310
Helix 103
AL4
F
902 923Right-handed alpha
Helix 104
AL5
F
926 936Right-handed alpha
Helix 105
AL6
F
937 941Right-handed 310
Helix 106
AL7
H
4 20Right-handed alpha
Helix 107
AL8
H
23 27Right-handed 310
Helix 108
AL9
H
40 56Right-handed alpha
Helix 109
AM1
H
60 67Right-handed alpha
Helix 110
AM2
H
69 81Right-handed alpha
Helix 111
AM3
I
4 20Right-handed alpha
Helix 112
AM4
I
23 27Right-handed 310
Helix 113
AM5
I
40 56Right-handed alpha
Helix 114
AM6
I
60 67Right-handed alpha
Helix 115
AM7
I
69 81Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 9MW0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
125 129first strand
Strand 2
D
148 155anti-parallel
Strand 3
D
91 99anti-parallel
Strand 4
D
184 189anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
480 484first strand
Strand 2
D
717 724anti-parallel
Strand 3
D
448 453anti-parallel
Strand 4
D
757 762anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
125 129first strand
Strand 2
E
148 155anti-parallel
Strand 3
E
91 99anti-parallel
Strand 4
E
184 189anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
480 484first strand
Strand 2
E
717 724anti-parallel
Strand 3
E
448 453anti-parallel
Strand 4
E
757 762anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
125 129first strand
Strand 2
F
148 155anti-parallel
Strand 3
F
91 99anti-parallel
Strand 4
F
184 189anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
480 484first strand
Strand 2
F
717 724anti-parallel
Strand 3
F
448 453anti-parallel
Strand 4
F
757 762anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il