Analysis of interatomic Contacts of Structural Units in PDB entry:
9MW5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MW5 entry

There are 6 chains in PDB entry 9MW5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 110	ILE 723
B	ASP 110	ILE 723
C	ASP 110	ILE 723
D	GLU 1	SER 125
E	GLU 1	SER 125
F	GLU 1	SER 125

There are 50 helices in PDB entry 9MW5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	193	200	Right-handed alpha
Helix 2	AA2	A	200	205	Right-handed alpha
Helix 3	AA3	A	225	227	Right-handed 310
Helix 4	AA4	A	306	310	Right-handed 310
Helix 5	AA5	A	315	317	Right-handed 310
Helix 6	AA6	A	403	407	Right-handed 310
Helix 7	AA7	A	411	429	Right-handed alpha
Helix 8	AA8	A	459	461	Right-handed 310
Helix 9	AA9	A	501	546	Right-handed alpha
Helix 10	AB1	A	546	556	Right-handed alpha
Helix 11	AB2	A	577	579	Right-handed 310
Helix 12	AB3	A	662	664	Right-handed 310
Helix 13	AB4	A	690	697	Right-handed alpha
Helix 14	AB5	A	701	710	Right-handed alpha
Helix 15	AB6	A	711	717	Right-handed alpha
Helix 16	AB7	B	193	200	Right-handed alpha
Helix 17	AB8	B	200	205	Right-handed alpha
Helix 18	AB9	B	225	227	Right-handed 310
Helix 19	AC1	B	306	310	Right-handed 310
Helix 20	AC2	B	315	317	Right-handed 310
Helix 21	AC3	B	403	407	Right-handed 310
Helix 22	AC4	B	411	429	Right-handed alpha
Helix 23	AC5	B	459	461	Right-handed 310
Helix 24	AC6	B	501	546	Right-handed alpha
Helix 25	AC7	B	546	556	Right-handed alpha
Helix 26	AC8	B	577	579	Right-handed 310
Helix 27	AC9	B	662	664	Right-handed 310
Helix 28	AD1	B	690	697	Right-handed alpha
Helix 29	AD2	B	701	710	Right-handed alpha
Helix 30	AD3	B	711	717	Right-handed alpha
Helix 31	AD4	C	193	200	Right-handed alpha
Helix 32	AD5	C	200	205	Right-handed alpha
Helix 33	AD6	C	225	227	Right-handed 310
Helix 34	AD7	C	306	310	Right-handed 310
Helix 35	AD8	C	315	317	Right-handed 310
Helix 36	AD9	C	358	363	Right-handed alpha
Helix 37	AE1	C	403	407	Right-handed 310
Helix 38	AE2	C	412	429	Right-handed alpha
Helix 39	AE3	C	459	461	Right-handed 310
Helix 40	AE4	C	501	546	Right-handed alpha
Helix 41	AE5	C	546	556	Right-handed alpha
Helix 42	AE6	C	577	579	Right-handed 310
Helix 43	AE7	C	662	664	Right-handed 310
Helix 44	AE8	C	690	697	Right-handed alpha
Helix 45	AE9	C	701	710	Right-handed alpha
Helix 46	AF1	C	712	717	Right-handed alpha
Helix 47	AF2	D	28	32	Right-handed 310
Helix 48	AF3	D	108	112	Right-handed 310
Helix 49	AF4	E	28	32	Right-handed 310
Helix 50	AF5	F	28	32	Right-handed 310

There are 44 sheets in PDB entry 9MW5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	115	first strand
Strand 2	A	574	576	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	559	562	first strand
Strand 2	A	568	572	anti-parallel
Strand 3	A	124	127	anti-parallel
Strand 4	C	665	667	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	366	372	first strand
Strand 2	A	144	152	anti-parallel
Strand 3	A	448	457	anti-parallel
Strand 4	A	433	435	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	366	372	first strand
Strand 2	A	144	152	anti-parallel
Strand 3	A	448	457	anti-parallel
Strand 4	A	440	444	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	179	191	first strand
Strand 2	A	157	176	anti-parallel
Strand 3	A	262	280	anti-parallel
Strand 4	A	287	289	anti-parallel
Strand 5	A	294	295	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	235	236	first strand
Strand 2	A	246	248	anti-parallel
Strand 3	A	262	280	anti-parallel
Strand 4	A	157	176	anti-parallel
Strand 5	A	351	355	anti-parallel
Strand 6	A	340	346	anti-parallel
Strand 7	A	319	325	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	206	208	first strand
Strand 2	A	231	233	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	210	215	first strand
Strand 2	A	218	223	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	375	380	first strand
Strand 2	A	383	388	anti-parallel
Strand 3	A	393	398	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	581	583	first strand
Strand 2	A	601	604	anti-parallel
Strand 3	A	613	617	anti-parallel
Strand 4	A	623	624	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	595	597	first strand
Strand 2	A	630	632	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	638	643	first strand
Strand 2	A	646	651	anti-parallel
Strand 3	A	654	660	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	665	667	first strand
Strand 2	B	124	127	parallel
Strand 3	B	568	572	anti-parallel
Strand 4	B	559	563	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	574	576	first strand
Strand 2	B	113	115	anti-parallel
Strand 3	B	622	624	parallel
Strand 4	B	613	617	anti-parallel
Strand 5	B	601	604	anti-parallel
Strand 6	B	581	583	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	366	372	first strand
Strand 2	B	145	152	anti-parallel
Strand 3	B	448	457	anti-parallel
Strand 4	B	433	435	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	366	372	first strand
Strand 2	B	145	152	anti-parallel
Strand 3	B	448	457	anti-parallel
Strand 4	B	440	444	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	179	191	first strand
Strand 2	B	157	176	anti-parallel
Strand 3	B	262	280	anti-parallel
Strand 4	B	287	289	anti-parallel
Strand 5	B	294	295	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	235	236	first strand
Strand 2	B	246	248	anti-parallel
Strand 3	B	262	280	anti-parallel
Strand 4	B	157	176	anti-parallel
Strand 5	B	351	355	anti-parallel
Strand 6	B	340	346	anti-parallel
Strand 7	B	319	325	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	206	208	first strand
Strand 2	B	231	233	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	210	215	first strand
Strand 2	B	218	223	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	375	380	first strand
Strand 2	B	383	388	anti-parallel
Strand 3	B	393	398	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	595	597	first strand
Strand 2	B	630	632	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	638	643	first strand
Strand 2	B	646	651	anti-parallel
Strand 3	B	654	660	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	665	667	first strand
Strand 2	C	124	127	parallel
Strand 3	C	568	572	anti-parallel
Strand 4	C	559	563	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	574	576	first strand
Strand 2	C	113	115	anti-parallel
Strand 3	C	622	624	parallel
Strand 4	C	613	617	anti-parallel
Strand 5	C	601	604	anti-parallel
Strand 6	C	581	583	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	366	372	first strand
Strand 2	C	145	152	anti-parallel
Strand 3	C	448	457	anti-parallel
Strand 4	C	433	435	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	366	372	first strand
Strand 2	C	145	152	anti-parallel
Strand 3	C	448	457	anti-parallel
Strand 4	C	440	444	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	180	191	first strand
Strand 2	C	157	175	anti-parallel
Strand 3	C	262	280	anti-parallel
Strand 4	C	287	289	anti-parallel
Strand 5	C	294	295	anti-parallel

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There are 7 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	235	236	first strand
Strand 2	C	246	248	anti-parallel
Strand 3	C	262	280	anti-parallel
Strand 4	C	157	175	anti-parallel
Strand 5	C	351	355	anti-parallel
Strand 6	C	340	346	anti-parallel
Strand 7	C	319	325	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	206	208	first strand
Strand 2	C	231	233	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	210	215	first strand
Strand 2	C	218	223	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	375	380	first strand
Strand 2	C	383	388	anti-parallel
Strand 3	C	393	398	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	595	597	first strand
Strand 2	C	630	632	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	638	643	first strand
Strand 2	C	646	651	anti-parallel
Strand 3	C	654	660	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	7	first strand
Strand 2	D	17	25	anti-parallel
Strand 3	D	78	84	anti-parallel
Strand 4	D	69	73	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	60	first strand
Strand 2	D	45	51	anti-parallel
Strand 3	D	34	39	anti-parallel
Strand 4	D	93	98	anti-parallel
Strand 5	D	114	115	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	60	first strand
Strand 2	D	45	51	anti-parallel
Strand 3	D	34	39	anti-parallel
Strand 4	D	93	98	anti-parallel
Strand 5	D	119	120	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	7	first strand
Strand 2	E	17	25	anti-parallel
Strand 3	E	78	84	anti-parallel
Strand 4	E	68	73	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	12	first strand
Strand 2	E	122	123	parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	58	60	first strand
Strand 2	E	45	51	anti-parallel
Strand 3	E	33	39	anti-parallel
Strand 4	E	93	99	anti-parallel
Strand 5	E	114	115	anti-parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	58	60	first strand
Strand 2	E	45	51	anti-parallel
Strand 3	E	33	39	anti-parallel
Strand 4	E	93	99	anti-parallel
Strand 5	E	119	120	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	7	first strand
Strand 2	F	17	25	anti-parallel
Strand 3	F	78	84	anti-parallel
Strand 4	F	68	73	anti-parallel

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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	60	first strand
Strand 2	F	45	51	anti-parallel
Strand 3	F	33	39	anti-parallel
Strand 4	F	93	99	anti-parallel
Strand 5	F	114	115	anti-parallel

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There are 5 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	60	first strand
Strand 2	F	45	51	anti-parallel
Strand 3	F	33	39	anti-parallel
Strand 4	F	93	99	anti-parallel
Strand 5	F	119	120	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MW5

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MW5