Analysis of interatomic Contacts of Structural Units in PDB entry:
9MWZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MWZ entry

There are 4 chains in PDB entry 9MWZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 1001	THR 1297
B	ARG 2012	GLN 2248
C	GLY 3001	GLN 3247
D	GLN 4028	VAL 4057

There are 22 helices in PDB entry 9MWZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1028	1032	Right-handed 310
Helix 2	AA2	A	1038	1043	Right-handed alpha
Helix 3	AA3	A	1054	1057	Right-handed 310
Helix 4	AA4	A	1058	1064	Right-handed alpha
Helix 5	AA5	A	1100	1108	Right-handed alpha
Helix 6	AA6	A	1160	1165	Right-handed 310
Helix 7	AA7	A	1212	1216	Right-handed 310
Helix 8	AA8	B	2035	2037	Right-handed 310
Helix 9	AA9	B	2056	2060	Right-handed 310
Helix 10	AB1	B	2083	2087	Right-handed 310
Helix 11	AB2	B	2089	2098	Right-handed alpha
Helix 12	AB3	B	2142	2147	Right-handed alpha
Helix 13	AB4	B	2148	2152	Right-handed 310
Helix 14	AB5	B	2157	2161	Right-handed 310
Helix 15	AB6	B	2169	2173	Right-handed 310
Helix 16	AB7	C	3043	3048	Right-handed alpha
Helix 17	AB8	C	3062	3068	Right-handed 310
Helix 18	AB9	C	3097	3104	Right-handed alpha
Helix 19	AC1	C	3143	3148	Right-handed alpha
Helix 20	AC2	C	3242	3247	Right-handed 310
Helix 21	AC3	D	4034	4038	Right-handed 310
Helix 22	AC4	D	4049	4054	Right-handed alpha

There are 12 sheets in PDB entry 9MWZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1003	1004	first strand
Strand 2	D	4046	4047	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1026	1027	first strand
Strand 2	C	3162	3167	anti-parallel
Strand 3	C	3113	3119	anti-parallel
Strand 4	C	3209	3218	anti-parallel
Strand 5	C	3051	3052	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1026	1027	first strand
Strand 2	C	3162	3167	anti-parallel
Strand 3	C	3113	3119	anti-parallel
Strand 4	C	3209	3218	anti-parallel
Strand 5	C	3069	3072	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1067	1076	first strand
Strand 2	A	1233	1251	anti-parallel
Strand 3	A	1110	1127	anti-parallel
Strand 4	A	1193	1194	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1180	1184	first strand
Strand 2	A	1110	1127	anti-parallel
Strand 3	A	1233	1251	anti-parallel
Strand 4	C	3039	3040	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1090	1094	first strand
Strand 2	A	1219	1224	anti-parallel
Strand 3	A	1142	1148	anti-parallel
Strand 4	A	1170	1174	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2014	2018	first strand
Strand 2	B	2021	2025	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2032	2033	first strand
Strand 2	B	2185	2190	parallel
Strand 3	B	2099	2111	anti-parallel
Strand 4	B	2226	2242	anti-parallel
Strand 5	B	2064	2065	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2032	2033	first strand
Strand 2	B	2185	2190	parallel
Strand 3	B	2099	2111	anti-parallel
Strand 4	B	2226	2242	anti-parallel
Strand 5	B	2069	2071	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2153	2154	first strand
Strand 2	B	2078	2082	anti-parallel
Strand 3	B	2207	2218	anti-parallel
Strand 4	B	2119	2128	anti-parallel
Strand 5	B	2175	2179	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3080	3085	first strand
Strand 2	C	3191	3196	anti-parallel
Strand 3	C	3128	3134	anti-parallel
Strand 4	C	3151	3156	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3176	3177	first strand
Strand 2	C	3108	3110	anti-parallel
Strand 3	C	3223	3225	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MWZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MWZ