Analysis of interatomic Contacts of Structural Units in PDB entry:
9MY4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MY4 entry

There are 8 chains in PDB entry 9MY4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 95SER 555
B
 ILE 10MET 146
C
 ASN 95SER 555
D
 ILE 10MET 146
E
 ASN 95SER 555
F
 ILE 10MET 146
G
 ASN 95SER 555
H
 ILE 10MET 146
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are100 helices in PDB entry 9MY4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
95 105Right-handed alpha
Helix 2
AA2
A
109 135Right-handed alpha
Helix 3
AA3
A
138 168Right-handed alpha
Helix 4
AA4
A
169 171Right-handed 310
Helix 5
AA5
A
176 185Right-handed alpha
Helix 6
AA6
A
186 205Right-handed alpha
Helix 7
AA7
A
217 224Right-handed alpha
Helix 8
AA8
A
225 230Right-handed alpha
Helix 9
AA9
A
235 248Right-handed alpha
Helix 10
AB1
A
248 274Right-handed alpha
Helix 11
AB2
A
288 300Right-handed alpha
Helix 12
AB3
A
312 348Right-handed alpha
Helix 13
AB4
A
353 356Right-handed 310
Helix 14
AB5
A
357 374Right-handed alpha
Helix 15
AB6
A
379 384Right-handed 310
Helix 16
AB7
A
498 521Right-handed alpha
Helix 17
AB8
A
526 553Right-handed alpha
Helix 18
AB9
B
12 21Right-handed alpha
Helix 19
AC1
B
29 39Right-handed alpha
Helix 20
AC2
B
45 55Right-handed alpha
Helix 21
AC3
B
66 74Right-handed alpha
Helix 22
AC4
B
79 93Right-handed alpha
Helix 23
AC5
B
102 113Right-handed alpha
Helix 24
AC6
B
118 128Right-handed alpha
Helix 25
AC7
B
138 146Right-handed alpha
Helix 26
AC8
C
96 105Right-handed alpha
Helix 27
AC9
C
109 135Right-handed alpha
Helix 28
AD1
C
138 168Right-handed alpha
Helix 29
AD2
C
169 171Right-handed 310
Helix 30
AD3
C
176 185Right-handed alpha
Helix 31
AD4
C
186 205Right-handed alpha
Helix 32
AD5
C
217 224Right-handed alpha
Helix 33
AD6
C
225 230Right-handed alpha
Helix 34
AD7
C
235 248Right-handed alpha
Helix 35
AD8
C
248 274Right-handed alpha
Helix 36
AD9
C
288 300Right-handed alpha
Helix 37
AE1
C
312 348Right-handed alpha
Helix 38
AE2
C
353 356Right-handed 310
Helix 39
AE3
C
357 374Right-handed alpha
Helix 40
AE4
C
379 384Right-handed 310
Helix 41
AE5
C
498 521Right-handed alpha
Helix 42
AE6
C
526 553Right-handed alpha
Helix 43
AE7
D
12 21Right-handed alpha
Helix 44
AE8
D
29 39Right-handed alpha
Helix 45
AE9
D
45 55Right-handed alpha
Helix 46
AF1
D
66 74Right-handed alpha
Helix 47
AF2
D
79 93Right-handed alpha
Helix 48
AF3
D
102 113Right-handed alpha
Helix 49
AF4
D
118 128Right-handed alpha
Helix 50
AF5
D
138 146Right-handed alpha
Helix 51
AF6
E
96 105Right-handed alpha
Helix 52
AF7
E
109 135Right-handed alpha
Helix 53
AF8
E
138 168Right-handed alpha
Helix 54
AF9
E
169 171Right-handed 310
Helix 55
AG1
E
176 185Right-handed alpha
Helix 56
AG2
E
186 205Right-handed alpha
Helix 57
AG3
E
217 224Right-handed alpha
Helix 58
AG4
E
225 230Right-handed alpha
Helix 59
AG5
E
235 248Right-handed alpha
Helix 60
AG6
E
248 274Right-handed alpha
Helix 61
AG7
E
288 300Right-handed alpha
Helix 62
AG8
E
312 348Right-handed alpha
Helix 63
AG9
E
353 356Right-handed 310
Helix 64
AH1
E
357 374Right-handed alpha
Helix 65
AH2
E
379 384Right-handed 310
Helix 66
AH3
E
498 521Right-handed alpha
Helix 67
AH4
E
526 553Right-handed alpha
Helix 68
AH5
F
12 21Right-handed alpha
Helix 69
AH6
F
29 39Right-handed alpha
Helix 70
AH7
F
45 55Right-handed alpha
Helix 71
AH8
F
66 74Right-handed alpha
Helix 72
AH9
F
79 93Right-handed alpha
Helix 73
AI1
F
102 113Right-handed alpha
Helix 74
AI2
F
118 128Right-handed alpha
Helix 75
AI3
F
138 146Right-handed alpha
Helix 76
AI4
G
96 105Right-handed alpha
Helix 77
AI5
G
109 135Right-handed alpha
Helix 78
AI6
G
138 168Right-handed alpha
Helix 79
AI7
G
169 171Right-handed 310
Helix 80
AI8
G
176 185Right-handed alpha
Helix 81
AI9
G
186 205Right-handed alpha
Helix 82
AJ1
G
217 224Right-handed alpha
Helix 83
AJ2
G
225 230Right-handed alpha
Helix 84
AJ3
G
235 248Right-handed alpha
Helix 85
AJ4
G
248 274Right-handed alpha
Helix 86
AJ5
G
288 300Right-handed alpha
Helix 87
AJ6
G
312 348Right-handed alpha
Helix 88
AJ7
G
353 356Right-handed 310
Helix 89
AJ8
G
357 374Right-handed alpha
Helix 90
AJ9
G
379 384Right-handed 310
Helix 91
AK1
G
498 521Right-handed alpha
Helix 92
AK2
G
526 553Right-handed alpha
Helix 93
AK3
H
12 21Right-handed alpha
Helix 94
AK4
H
29 39Right-handed alpha
Helix 95
AK5
H
45 55Right-handed alpha
Helix 96
AK6
H
66 74Right-handed alpha
Helix 97
AK7
H
79 93Right-handed alpha
Helix 98
AK8
H
102 113Right-handed alpha
Helix 99
AK9
H
118 128Right-handed alpha
Helix 100
AL1
H
138 146Right-handed alpha
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There are 4 sheets in PDB entry 9MY4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 28first strand
Strand 2
B
64 65anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
27 28first strand
Strand 2
D
64 65anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
27 28first strand
Strand 2
F
64 65anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
27 28first strand
Strand 2
H
64 65anti-parallel
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