Analysis of interatomic Contacts of Structural Units in PDB entry:
9MZI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MZI entry

There are 4 chains in PDB entry 9MZI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 33	VAL 835
B	THR 33	VAL 839
C	THR 33	VAL 839
D	THR 33	PHE 836

There are111 helices in PDB entry 9MZI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	51	67	Right-handed alpha
Helix 2	AA2	A	87	101	Right-handed alpha
Helix 3	AA3	A	111	126	Right-handed alpha
Helix 4	AA4	A	152	168	Right-handed alpha
Helix 5	AA5	A	178	185	Right-handed alpha
Helix 6	AA6	A	185	190	Right-handed alpha
Helix 7	AA7	A	190	195	Right-handed alpha
Helix 8	AA8	A	211	222	Right-handed alpha
Helix 9	AA9	A	231	245	Right-handed alpha
Helix 10	AB1	A	286	300	Right-handed alpha
Helix 11	AB2	A	317	337	Right-handed alpha
Helix 12	AB3	A	355	365	Right-handed alpha
Helix 13	AB4	A	461	475	Right-handed alpha
Helix 14	AB5	A	500	507	Right-handed alpha
Helix 15	AB6	A	520	527	Right-handed alpha
Helix 16	AB7	A	550	554	Right-handed 310
Helix 17	AB8	A	560	579	Right-handed alpha
Helix 18	AB9	A	631	665	Right-handed alpha
Helix 19	AC1	A	671	677	Right-handed alpha
Helix 20	AC2	A	690	695	Right-handed alpha
Helix 21	AC3	A	700	710	Right-handed alpha
Helix 22	AC4	A	720	730	Right-handed alpha
Helix 23	AC5	A	739	749	Right-handed alpha
Helix 24	AC6	A	773	788	Right-handed alpha
Helix 25	AC7	A	790	799	Right-handed alpha
Helix 26	AC8	A	817	833	Right-handed alpha
Helix 27	AC9	B	51	67	Right-handed alpha
Helix 28	AD1	B	87	101	Right-handed alpha
Helix 29	AD2	B	111	126	Right-handed alpha
Helix 30	AD3	B	152	168	Right-handed alpha
Helix 31	AD4	B	178	184	Right-handed 310
Helix 32	AD5	B	185	190	Right-handed alpha
Helix 33	AD6	B	190	195	Right-handed alpha
Helix 34	AD7	B	211	221	Right-handed alpha
Helix 35	AD8	B	231	245	Right-handed alpha
Helix 36	AD9	B	266	270	Right-handed 310
Helix 37	AE1	B	286	298	Right-handed alpha
Helix 38	AE2	B	299	301	Right-handed 310
Helix 39	AE3	B	317	336	Right-handed alpha
Helix 40	AE4	B	355	364	Right-handed alpha
Helix 41	AE5	B	415	417	Right-handed 310
Helix 42	AE6	B	461	474	Right-handed alpha
Helix 43	AE7	B	500	507	Right-handed alpha
Helix 44	AE8	B	520	526	Right-handed alpha
Helix 45	AE9	B	560	583	Right-handed alpha
Helix 46	AF1	B	631	663	Right-handed alpha
Helix 47	AF2	B	688	696	Right-handed alpha
Helix 48	AF3	B	699	712	Right-handed alpha
Helix 49	AF4	B	712	717	Right-handed alpha
Helix 50	AF5	B	720	731	Right-handed alpha
Helix 51	AF6	B	738	749	Right-handed alpha
Helix 52	AF7	B	772	789	Right-handed alpha
Helix 53	AF8	B	789	797	Right-handed alpha
Helix 54	AF9	B	823	839	Right-handed alpha
Helix 55	AG1	C	51	67	Right-handed alpha
Helix 56	AG2	C	87	101	Right-handed alpha
Helix 57	AG3	C	111	125	Right-handed alpha
Helix 58	AG4	C	152	168	Right-handed alpha
Helix 59	AG5	C	180	185	Right-handed alpha
Helix 60	AG6	C	185	190	Right-handed alpha
Helix 61	AG7	C	190	195	Right-handed alpha
Helix 62	AG8	C	211	221	Right-handed alpha
Helix 63	AG9	C	231	245	Right-handed alpha
Helix 64	AH1	C	260	264	Right-handed 310
Helix 65	AH2	C	266	271	Right-handed alpha
Helix 66	AH3	C	286	301	Right-handed alpha
Helix 67	AH4	C	317	336	Right-handed alpha
Helix 68	AH5	C	355	366	Right-handed alpha
Helix 69	AH6	C	455	457	Right-handed 310
Helix 70	AH7	C	461	474	Right-handed alpha
Helix 71	AH8	C	500	507	Right-handed alpha
Helix 72	AH9	C	520	527	Right-handed alpha
Helix 73	AI1	C	553	557	Right-handed 310
Helix 74	AI2	C	560	583	Right-handed alpha
Helix 75	AI3	C	631	665	Right-handed alpha
Helix 76	AI4	C	670	677	Right-handed alpha
Helix 77	AI5	C	688	697	Right-handed alpha
Helix 78	AI6	C	699	712	Right-handed alpha
Helix 79	AI7	C	721	731	Right-handed alpha
Helix 80	AI8	C	739	749	Right-handed alpha
Helix 81	AI9	C	772	789	Right-handed alpha
Helix 82	AJ1	C	790	800	Right-handed alpha
Helix 83	AJ2	C	820	835	Right-handed alpha
Helix 84	AJ3	D	51	67	Right-handed alpha
Helix 85	AJ4	D	87	101	Right-handed alpha
Helix 86	AJ5	D	111	126	Right-handed alpha
Helix 87	AJ6	D	152	168	Right-handed alpha
Helix 88	AJ7	D	179	185	Right-handed alpha
Helix 89	AJ8	D	185	190	Right-handed alpha
Helix 90	AJ9	D	190	195	Right-handed alpha
Helix 91	AK1	D	207	210	Right-handed 310
Helix 92	AK2	D	211	221	Right-handed alpha
Helix 93	AK3	D	231	245	Right-handed alpha
Helix 94	AK4	D	260	264	Right-handed 310
Helix 95	AK5	D	286	298	Right-handed alpha
Helix 96	AK6	D	317	337	Right-handed alpha
Helix 97	AK7	D	355	364	Right-handed alpha
Helix 98	AK8	D	413	418	Right-handed alpha
Helix 99	AK9	D	461	474	Right-handed alpha
Helix 100	AL1	D	500	507	Right-handed alpha
Helix 101	AL2	D	520	525	Right-handed alpha
Helix 102	AL3	D	560	580	Right-handed alpha
Helix 103	AL4	D	631	664	Right-handed alpha
Helix 104	AL5	D	688	697	Right-handed alpha
Helix 105	AL6	D	699	712	Right-handed alpha
Helix 106	AL7	D	712	717	Right-handed alpha
Helix 107	AL8	D	720	731	Right-handed alpha
Helix 108	AL9	D	738	749	Right-handed alpha
Helix 109	AM1	D	773	788	Right-handed alpha
Helix 110	AM2	D	820	829	Right-handed alpha
Helix 111	AM3	D	830	836	Right-handed 310

There are 32 sheets in PDB entry 9MZI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	83	first strand
Strand 2	A	35	43	parallel
Strand 3	A	103	107	parallel
Strand 4	A	129	131	parallel
Strand 5	A	146	148	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	200	203	first strand
Strand 2	A	173	176	parallel
Strand 3	A	225	229	parallel
Strand 4	A	253	256	parallel
Strand 5	A	277	280	parallel
Strand 6	A	389	395	anti-parallel
Strand 7	A	398	405	anti-parallel
Strand 8	A	412	413	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	369	370	first strand
Strand 2	A	373	374	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	432	436	first strand
Strand 2	A	477	481	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	446	first strand
Strand 2	A	459	460	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	490	492	first strand
Strand 2	A	497	499	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	528	529	first strand
Strand 2	A	767	768	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	534	535	first strand
Strand 2	A	763	764	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	682	683	first strand
Strand 2	A	734	738	parallel
Strand 3	A	538	543	anti-parallel
Strand 4	A	752	754	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	83	first strand
Strand 2	B	35	43	parallel
Strand 3	B	106	107	parallel
Strand 4	B	129	131	parallel
Strand 5	B	146	148	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	200	203	first strand
Strand 2	B	173	176	parallel
Strand 3	B	225	229	parallel
Strand 4	B	253	256	parallel
Strand 5	B	277	280	parallel
Strand 6	B	390	394	anti-parallel
Strand 7	B	399	401	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	368	369	first strand
Strand 2	B	374	375	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	403	406	first strand
Strand 2	B	410	413	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	435	437	first strand
Strand 2	B	480	482	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	490	492	first strand
Strand 2	B	497	499	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	527	528	first strand
Strand 2	B	768	769	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	534	536	first strand
Strand 2	B	762	764	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	541	542	first strand
Strand 2	B	733	736	anti-parallel
Strand 3	B	681	684	parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	83	first strand
Strand 2	C	35	43	parallel
Strand 3	C	103	107	parallel
Strand 4	C	129	131	parallel
Strand 5	C	146	148	parallel

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There are 8 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	198	203	first strand
Strand 2	C	171	176	parallel
Strand 3	C	225	229	parallel
Strand 4	C	253	256	parallel
Strand 5	C	277	280	parallel
Strand 6	C	389	393	anti-parallel
Strand 7	C	400	405	anti-parallel
Strand 8	C	411	413	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	435	437	first strand
Strand 2	C	480	482	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	445	446	first strand
Strand 2	C	459	460	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	490	491	first strand
Strand 2	C	498	499	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	528	529	first strand
Strand 2	C	767	768	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	682	684	first strand
Strand 2	C	734	738	parallel
Strand 3	C	538	543	anti-parallel
Strand 4	C	752	753	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	78	first strand
Strand 2	D	37	40	parallel
Strand 3	D	105	107	parallel
Strand 4	D	129	131	parallel
Strand 5	D	147	148	parallel

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There are 8 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	200	203	first strand
Strand 2	D	173	176	parallel
Strand 3	D	225	228	parallel
Strand 4	D	253	256	parallel
Strand 5	D	277	280	parallel
Strand 6	D	390	395	anti-parallel
Strand 7	D	398	406	anti-parallel
Strand 8	D	410	412	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	368	370	first strand
Strand 2	D	373	375	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	434	436	first strand
Strand 2	D	479	481	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	445	446	first strand
Strand 2	D	459	460	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	490	492	first strand
Strand 2	D	497	499	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	682	684	first strand
Strand 2	D	734	737	parallel
Strand 3	D	539	543	anti-parallel
Strand 4	D	752	754	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MZI

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MZI