Analysis of interatomic Contacts of Structural Units in PDB entry:
9MZL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MZL entry

There are 4 chains in PDB entry 9MZL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 33	VAL 835
B	THR 33	VAL 839
C	THR 33	VAL 837
D	THR 33	ALA 838

There are109 helices in PDB entry 9MZL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	51	67	Right-handed alpha
Helix 2	AA2	A	87	101	Right-handed alpha
Helix 3	AA3	A	111	126	Right-handed alpha
Helix 4	AA4	A	152	168	Right-handed alpha
Helix 5	AA5	A	182	184	Right-handed 310
Helix 6	AA6	A	185	190	Right-handed alpha
Helix 7	AA7	A	190	195	Right-handed alpha
Helix 8	AA8	A	211	222	Right-handed alpha
Helix 9	AA9	A	231	245	Right-handed alpha
Helix 10	AB1	A	286	298	Right-handed alpha
Helix 11	AB2	A	317	336	Right-handed alpha
Helix 12	AB3	A	356	366	Right-handed alpha
Helix 13	AB4	A	416	420	Right-handed 310
Helix 14	AB5	A	461	474	Right-handed alpha
Helix 15	AB6	A	502	507	Right-handed alpha
Helix 16	AB7	A	520	525	Right-handed alpha
Helix 17	AB8	A	553	557	Right-handed 310
Helix 18	AB9	A	567	581	Right-handed alpha
Helix 19	AC1	A	633	664	Right-handed alpha
Helix 20	AC2	A	671	677	Right-handed alpha
Helix 21	AC3	A	688	697	Right-handed alpha
Helix 22	AC4	A	699	712	Right-handed alpha
Helix 23	AC5	A	712	717	Right-handed alpha
Helix 24	AC6	A	721	731	Right-handed alpha
Helix 25	AC7	A	738	747	Right-handed alpha
Helix 26	AC8	A	772	787	Right-handed alpha
Helix 27	AC9	A	792	799	Right-handed alpha
Helix 28	AD1	A	821	835	Right-handed alpha
Helix 29	AD2	B	51	67	Right-handed alpha
Helix 30	AD3	B	87	101	Right-handed alpha
Helix 31	AD4	B	111	126	Right-handed alpha
Helix 32	AD5	B	152	167	Right-handed alpha
Helix 33	AD6	B	178	184	Right-handed 310
Helix 34	AD7	B	185	190	Right-handed alpha
Helix 35	AD8	B	190	195	Right-handed alpha
Helix 36	AD9	B	211	221	Right-handed alpha
Helix 37	AE1	B	231	245	Right-handed alpha
Helix 38	AE2	B	260	264	Right-handed 310
Helix 39	AE3	B	286	300	Right-handed alpha
Helix 40	AE4	B	317	337	Right-handed alpha
Helix 41	AE5	B	355	366	Right-handed alpha
Helix 42	AE6	B	461	473	Right-handed alpha
Helix 43	AE7	B	500	508	Right-handed alpha
Helix 44	AE8	B	520	527	Right-handed alpha
Helix 45	AE9	B	553	557	Right-handed 310
Helix 46	AF1	B	560	583	Right-handed alpha
Helix 47	AF2	B	633	661	Right-handed alpha
Helix 48	AF3	B	670	676	Right-handed alpha
Helix 49	AF4	B	688	697	Right-handed alpha
Helix 50	AF5	B	699	710	Right-handed alpha
Helix 51	AF6	B	720	730	Right-handed alpha
Helix 52	AF7	B	739	749	Right-handed alpha
Helix 53	AF8	B	773	788	Right-handed alpha
Helix 54	AF9	B	789	798	Right-handed alpha
Helix 55	AG1	B	824	839	Right-handed alpha
Helix 56	AG2	C	51	67	Right-handed alpha
Helix 57	AG3	C	88	101	Right-handed alpha
Helix 58	AG4	C	111	125	Right-handed alpha
Helix 59	AG5	C	152	168	Right-handed alpha
Helix 60	AG6	C	178	185	Right-handed alpha
Helix 61	AG7	C	185	190	Right-handed alpha
Helix 62	AG8	C	190	195	Right-handed alpha
Helix 63	AG9	C	211	221	Right-handed alpha
Helix 64	AH1	C	231	242	Right-handed alpha
Helix 65	AH2	C	260	264	Right-handed 310
Helix 66	AH3	C	266	271	Right-handed alpha
Helix 67	AH4	C	286	298	Right-handed alpha
Helix 68	AH5	C	299	301	Right-handed 310
Helix 69	AH6	C	317	336	Right-handed alpha
Helix 70	AH7	C	355	366	Right-handed alpha
Helix 71	AH8	C	461	475	Right-handed alpha
Helix 72	AH9	C	502	507	Right-handed alpha
Helix 73	AI1	C	560	581	Right-handed alpha
Helix 74	AI2	C	633	665	Right-handed alpha
Helix 75	AI3	C	670	675	Right-handed alpha
Helix 76	AI4	C	676	680	Right-handed 310
Helix 77	AI5	C	688	697	Right-handed alpha
Helix 78	AI6	C	699	712	Right-handed alpha
Helix 79	AI7	C	720	731	Right-handed alpha
Helix 80	AI8	C	739	749	Right-handed alpha
Helix 81	AI9	C	774	788	Right-handed alpha
Helix 82	AJ1	C	791	799	Right-handed alpha
Helix 83	AJ2	C	812	816	Right-handed 310
Helix 84	AJ3	C	820	836	Right-handed alpha
Helix 85	AJ4	D	51	67	Right-handed alpha
Helix 86	AJ5	D	87	100	Right-handed alpha
Helix 87	AJ6	D	112	126	Right-handed alpha
Helix 88	AJ7	D	152	168	Right-handed alpha
Helix 89	AJ8	D	179	185	Right-handed alpha
Helix 90	AJ9	D	211	221	Right-handed alpha
Helix 91	AK1	D	231	245	Right-handed alpha
Helix 92	AK2	D	286	300	Right-handed alpha
Helix 93	AK3	D	317	337	Right-handed alpha
Helix 94	AK4	D	355	365	Right-handed alpha
Helix 95	AK5	D	461	475	Right-handed alpha
Helix 96	AK6	D	500	507	Right-handed alpha
Helix 97	AK7	D	520	527	Right-handed alpha
Helix 98	AK8	D	551	555	Right-handed 310
Helix 99	AK9	D	560	582	Right-handed alpha
Helix 100	AL1	D	633	657	Right-handed alpha
Helix 101	AL2	D	672	677	Right-handed alpha
Helix 102	AL3	D	688	696	Right-handed alpha
Helix 103	AL4	D	702	711	Right-handed alpha
Helix 104	AL5	D	712	717	Right-handed alpha
Helix 105	AL6	D	720	731	Right-handed alpha
Helix 106	AL7	D	739	749	Right-handed alpha
Helix 107	AL8	D	772	789	Right-handed alpha
Helix 108	AL9	D	791	799	Right-handed alpha
Helix 109	AM1	D	823	838	Right-handed alpha

There are 32 sheets in PDB entry 9MZL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	77	first strand
Strand 2	A	35	40	parallel
Strand 3	A	105	107	parallel
Strand 4	A	129	131	parallel
Strand 5	A	146	148	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	43	first strand
Strand 2	A	82	83	parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	198	203	first strand
Strand 2	A	171	176	parallel
Strand 3	A	225	229	parallel
Strand 4	A	253	256	parallel
Strand 5	A	277	280	parallel
Strand 6	A	390	394	anti-parallel
Strand 7	A	399	401	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	433	437	first strand
Strand 2	A	478	482	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	446	first strand
Strand 2	A	459	460	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	490	491	first strand
Strand 2	A	498	499	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	528	529	first strand
Strand 2	A	767	768	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	535	536	first strand
Strand 2	A	762	763	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	542	543	first strand
Strand 2	A	752	753	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	682	683	first strand
Strand 2	A	734	735	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	43	first strand
Strand 2	B	74	83	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	106	107	first strand
Strand 2	B	129	131	parallel
Strand 3	B	146	148	parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	202	203	first strand
Strand 2	B	173	176	parallel
Strand 3	B	225	228	parallel
Strand 4	B	253	256	parallel
Strand 5	B	277	280	parallel
Strand 6	B	389	394	anti-parallel
Strand 7	B	399	405	anti-parallel
Strand 8	B	412	413	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	435	436	first strand
Strand 2	B	480	481	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	446	first strand
Strand 2	B	459	460	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	735	738	first strand
Strand 2	B	538	543	anti-parallel
Strand 3	B	752	754	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	83	first strand
Strand 2	C	35	43	parallel
Strand 3	C	105	107	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	130	131	first strand
Strand 2	C	147	148	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	199	201	first strand
Strand 2	C	172	176	parallel
Strand 3	C	226	229	parallel
Strand 4	C	255	256	parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	277	280	first strand
Strand 2	C	390	394	anti-parallel
Strand 3	C	399	401	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	368	370	first strand
Strand 2	C	373	375	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	404	405	first strand
Strand 2	C	411	412	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	432	433	first strand
Strand 2	C	477	478	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	445	446	first strand
Strand 2	C	459	460	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	527	529	first strand
Strand 2	C	767	769	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	681	683	first strand
Strand 2	C	733	738	parallel
Strand 3	C	538	543	anti-parallel
Strand 4	C	752	753	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	74	83	first strand
Strand 2	D	34	43	parallel
Strand 3	D	106	107	parallel
Strand 4	D	129	131	parallel
Strand 5	D	147	148	parallel

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There are 8 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	198	203	first strand
Strand 2	D	171	176	parallel
Strand 3	D	225	229	parallel
Strand 4	D	253	256	parallel
Strand 5	D	277	280	parallel
Strand 6	D	389	394	anti-parallel
Strand 7	D	399	406	anti-parallel
Strand 8	D	410	413	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	368	370	first strand
Strand 2	D	373	375	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	433	436	first strand
Strand 2	D	478	481	parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	513	517	first strand
Strand 2	D	765	768	anti-parallel
Strand 3	D	528	529	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	681	683	first strand
Strand 2	D	733	738	parallel
Strand 3	D	538	542	anti-parallel
Strand 4	D	753	755	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MZL

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MZL