Analysis of interatomic Contacts of Structural Units in PDB entry:
9MZM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MZM entry

There are 4 chains in PDB entry 9MZM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 33	SER 846
B	THR 33	TYR 844
C	THR 33	SER 846
D	THR 33	LYS 845

There are108 helices in PDB entry 9MZM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	51	67	Right-handed alpha
Helix 2	AA2	A	87	101	Right-handed alpha
Helix 3	AA3	A	111	126	Right-handed alpha
Helix 4	AA4	A	152	167	Right-handed alpha
Helix 5	AA5	A	180	185	Right-handed alpha
Helix 6	AA6	A	185	190	Right-handed alpha
Helix 7	AA7	A	190	195	Right-handed alpha
Helix 8	AA8	A	211	221	Right-handed alpha
Helix 9	AA9	A	231	245	Right-handed alpha
Helix 10	AB1	A	260	264	Right-handed 310
Helix 11	AB2	A	286	299	Right-handed alpha
Helix 12	AB3	A	317	337	Right-handed alpha
Helix 13	AB4	A	355	365	Right-handed alpha
Helix 14	AB5	A	461	474	Right-handed alpha
Helix 15	AB6	A	500	507	Right-handed alpha
Helix 16	AB7	A	520	525	Right-handed alpha
Helix 17	AB8	A	560	584	Right-handed alpha
Helix 18	AB9	A	635	665	Right-handed alpha
Helix 19	AC1	A	670	677	Right-handed alpha
Helix 20	AC2	A	688	696	Right-handed alpha
Helix 21	AC3	A	699	712	Right-handed alpha
Helix 22	AC4	A	720	731	Right-handed alpha
Helix 23	AC5	A	739	749	Right-handed alpha
Helix 24	AC6	A	772	788	Right-handed alpha
Helix 25	AC7	A	789	793	Right-handed 310
Helix 26	AC8	A	816	846	Right-handed alpha
Helix 27	AC9	B	51	67	Right-handed alpha
Helix 28	AD1	B	87	101	Right-handed alpha
Helix 29	AD2	B	111	126	Right-handed alpha
Helix 30	AD3	B	152	167	Right-handed alpha
Helix 31	AD4	B	180	185	Right-handed alpha
Helix 32	AD5	B	185	190	Right-handed alpha
Helix 33	AD6	B	211	222	Right-handed alpha
Helix 34	AD7	B	231	245	Right-handed alpha
Helix 35	AD8	B	260	264	Right-handed 310
Helix 36	AD9	B	266	271	Right-handed alpha
Helix 37	AE1	B	286	300	Right-handed alpha
Helix 38	AE2	B	317	337	Right-handed alpha
Helix 39	AE3	B	355	364	Right-handed alpha
Helix 40	AE4	B	461	474	Right-handed alpha
Helix 41	AE5	B	501	506	Right-handed alpha
Helix 42	AE6	B	522	526	Right-handed 310
Helix 43	AE7	B	553	557	Right-handed 310
Helix 44	AE8	B	560	584	Right-handed alpha
Helix 45	AE9	B	630	661	Right-handed alpha
Helix 46	AF1	B	670	677	Right-handed alpha
Helix 47	AF2	B	688	697	Right-handed alpha
Helix 48	AF3	B	699	712	Right-handed alpha
Helix 49	AF4	B	720	731	Right-handed alpha
Helix 50	AF5	B	739	749	Right-handed alpha
Helix 51	AF6	B	773	785	Right-handed alpha
Helix 52	AF7	B	789	798	Right-handed alpha
Helix 53	AF8	B	822	844	Right-handed alpha
Helix 54	AF9	C	51	67	Right-handed alpha
Helix 55	AG1	C	87	101	Right-handed alpha
Helix 56	AG2	C	111	126	Right-handed alpha
Helix 57	AG3	C	152	168	Right-handed alpha
Helix 58	AG4	C	180	185	Right-handed alpha
Helix 59	AG5	C	185	190	Right-handed alpha
Helix 60	AG6	C	191	194	Right-handed 310
Helix 61	AG7	C	211	221	Right-handed alpha
Helix 62	AG8	C	231	245	Right-handed alpha
Helix 63	AG9	C	260	264	Right-handed 310
Helix 64	AH1	C	286	298	Right-handed alpha
Helix 65	AH2	C	317	337	Right-handed alpha
Helix 66	AH3	C	356	365	Right-handed alpha
Helix 67	AH4	C	461	475	Right-handed alpha
Helix 68	AH5	C	502	507	Right-handed alpha
Helix 69	AH6	C	520	526	Right-handed alpha
Helix 70	AH7	C	560	584	Right-handed alpha
Helix 71	AH8	C	630	665	Right-handed alpha
Helix 72	AH9	C	670	677	Right-handed alpha
Helix 73	AI1	C	688	696	Right-handed alpha
Helix 74	AI2	C	699	712	Right-handed alpha
Helix 75	AI3	C	721	731	Right-handed alpha
Helix 76	AI4	C	738	749	Right-handed alpha
Helix 77	AI5	C	773	789	Right-handed alpha
Helix 78	AI6	C	789	796	Right-handed alpha
Helix 79	AI7	C	820	842	Right-handed alpha
Helix 80	AI8	D	51	67	Right-handed alpha
Helix 81	AI9	D	87	101	Right-handed alpha
Helix 82	AJ1	D	111	125	Right-handed alpha
Helix 83	AJ2	D	152	167	Right-handed alpha
Helix 84	AJ3	D	179	185	Right-handed alpha
Helix 85	AJ4	D	185	190	Right-handed alpha
Helix 86	AJ5	D	211	221	Right-handed alpha
Helix 87	AJ6	D	231	245	Right-handed alpha
Helix 88	AJ7	D	260	264	Right-handed 310
Helix 89	AJ8	D	266	271	Right-handed alpha
Helix 90	AJ9	D	286	300	Right-handed alpha
Helix 91	AK1	D	317	336	Right-handed alpha
Helix 92	AK2	D	355	365	Right-handed alpha
Helix 93	AK3	D	429	432	Right-handed 310
Helix 94	AK4	D	454	457	Right-handed 310
Helix 95	AK5	D	462	474	Right-handed alpha
Helix 96	AK6	D	500	507	Right-handed alpha
Helix 97	AK7	D	553	557	Right-handed 310
Helix 98	AK8	D	560	584	Right-handed alpha
Helix 99	AK9	D	632	661	Right-handed alpha
Helix 100	AL1	D	670	676	Right-handed 310
Helix 101	AL2	D	688	697	Right-handed alpha
Helix 102	AL3	D	699	712	Right-handed alpha
Helix 103	AL4	D	712	717	Right-handed alpha
Helix 104	AL5	D	720	731	Right-handed alpha
Helix 105	AL6	D	739	749	Right-handed alpha
Helix 106	AL7	D	776	788	Right-handed alpha
Helix 107	AL8	D	790	796	Right-handed alpha
Helix 108	AL9	D	816	844	Right-handed alpha

There are 37 sheets in PDB entry 9MZM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	83	first strand
Strand 2	A	35	43	parallel
Strand 3	A	103	107	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	131	first strand
Strand 2	A	146	148	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	198	199	first strand
Strand 2	A	171	176	parallel
Strand 3	A	202	203	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	198	199	first strand
Strand 2	A	171	176	parallel
Strand 3	A	225	229	parallel
Strand 4	A	253	256	parallel
Strand 5	A	275	280	parallel
Strand 6	A	390	394	anti-parallel
Strand 7	A	399	401	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	405	406	first strand
Strand 2	A	410	411	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	432	437	first strand
Strand 2	A	477	482	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	446	first strand
Strand 2	A	459	460	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	528	529	first strand
Strand 2	A	767	768	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	682	684	first strand
Strand 2	A	734	738	parallel
Strand 3	A	535	543	anti-parallel
Strand 4	A	752	755	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	682	684	first strand
Strand 2	A	734	738	parallel
Strand 3	A	535	543	anti-parallel
Strand 4	A	761	763	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	82	first strand
Strand 2	B	35	42	parallel
Strand 3	B	105	107	parallel
Strand 4	B	129	131	parallel
Strand 5	B	146	148	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	202	203	first strand
Strand 2	B	173	176	parallel
Strand 3	B	226	228	parallel
Strand 4	B	254	255	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	389	395	first strand
Strand 2	B	398	406	anti-parallel
Strand 3	B	410	412	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	432	435	first strand
Strand 2	B	477	480	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	446	first strand
Strand 2	B	459	460	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	682	683	first strand
Strand 2	B	734	738	parallel
Strand 3	B	534	543	anti-parallel
Strand 4	B	752	754	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	682	683	first strand
Strand 2	B	734	738	parallel
Strand 3	B	534	543	anti-parallel
Strand 4	B	761	764	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	74	83	first strand
Strand 2	C	34	43	parallel
Strand 3	C	106	107	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	129	131	first strand
Strand 2	C	146	148	parallel

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There are 8 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	198	203	first strand
Strand 2	C	171	176	parallel
Strand 3	C	225	229	parallel
Strand 4	C	253	256	parallel
Strand 5	C	275	280	parallel
Strand 6	C	390	393	anti-parallel
Strand 7	C	400	404	anti-parallel
Strand 8	C	412	413	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	433	437	first strand
Strand 2	C	478	482	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	445	446	first strand
Strand 2	C	459	460	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	490	491	first strand
Strand 2	C	498	499	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	527	529	first strand
Strand 2	C	767	769	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	534	535	first strand
Strand 2	C	763	764	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	540	543	first strand
Strand 2	C	752	755	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	681	682	first strand
Strand 2	C	733	734	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	37	first strand
Strand 2	D	75	77	parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	80	83	first strand
Strand 2	D	39	43	parallel
Strand 3	D	106	107	parallel
Strand 4	D	129	131	parallel
Strand 5	D	147	148	parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	202	203	first strand
Strand 2	D	174	176	parallel
Strand 3	D	225	229	parallel
Strand 4	D	253	256	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	369	370	first strand
Strand 2	D	373	374	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	389	395	first strand
Strand 2	D	398	405	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	434	436	first strand
Strand 2	D	479	481	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	444	446	first strand
Strand 2	D	459	461	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	528	529	first strand
Strand 2	D	767	768	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	535	536	first strand
Strand 2	D	762	763	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	682	683	first strand
Strand 2	D	734	738	parallel
Strand 3	D	538	543	anti-parallel
Strand 4	D	752	755	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MZM

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MZM