Analysis of interatomic Contacts of Structural Units in PDB entry:
9MZO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MZO entry

There are 4 chains in PDB entry 9MZO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 432	SER 846
B	SER 432	TYR 844
C	SER 432	SER 846
D	SER 432	LYS 845

There are 58 helices in PDB entry 9MZO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	461	474	Right-handed alpha
Helix 2	AA2	A	499	507	Right-handed alpha
Helix 3	AA3	A	520	527	Right-handed alpha
Helix 4	AA4	A	560	584	Right-handed alpha
Helix 5	AA5	A	634	665	Right-handed alpha
Helix 6	AA6	A	670	677	Right-handed alpha
Helix 7	AA7	A	688	697	Right-handed alpha
Helix 8	AA8	A	699	711	Right-handed alpha
Helix 9	AA9	A	720	731	Right-handed alpha
Helix 10	AB1	A	739	749	Right-handed alpha
Helix 11	AB2	A	773	788	Right-handed alpha
Helix 12	AB3	A	789	798	Right-handed alpha
Helix 13	AB4	A	816	846	Right-handed alpha
Helix 14	AB5	B	455	457	Right-handed 310
Helix 15	AB6	B	461	474	Right-handed alpha
Helix 16	AB7	B	500	506	Right-handed alpha
Helix 17	AB8	B	520	525	Right-handed alpha
Helix 18	AB9	B	553	557	Right-handed 310
Helix 19	AC1	B	560	584	Right-handed alpha
Helix 20	AC2	B	630	661	Right-handed alpha
Helix 21	AC3	B	670	677	Right-handed alpha
Helix 22	AC4	B	688	697	Right-handed alpha
Helix 23	AC5	B	699	712	Right-handed alpha
Helix 24	AC6	B	720	731	Right-handed alpha
Helix 25	AC7	B	739	749	Right-handed alpha
Helix 26	AC8	B	773	788	Right-handed alpha
Helix 27	AC9	B	789	799	Right-handed alpha
Helix 28	AD1	B	816	821	Right-handed alpha
Helix 29	AD2	B	822	844	Right-handed alpha
Helix 30	AD3	C	454	458	Right-handed 310
Helix 31	AD4	C	461	474	Right-handed alpha
Helix 32	AD5	C	500	507	Right-handed alpha
Helix 33	AD6	C	520	525	Right-handed alpha
Helix 34	AD7	C	560	584	Right-handed alpha
Helix 35	AD8	C	630	665	Right-handed alpha
Helix 36	AD9	C	670	677	Right-handed alpha
Helix 37	AE1	C	688	696	Right-handed alpha
Helix 38	AE2	C	699	712	Right-handed alpha
Helix 39	AE3	C	720	731	Right-handed alpha
Helix 40	AE4	C	739	749	Right-handed alpha
Helix 41	AE5	C	774	789	Right-handed alpha
Helix 42	AE6	C	790	800	Right-handed alpha
Helix 43	AE7	C	820	844	Right-handed alpha
Helix 44	AE8	D	455	459	Right-handed 310
Helix 45	AE9	D	461	474	Right-handed alpha
Helix 46	AF1	D	499	506	Right-handed alpha
Helix 47	AF2	D	560	584	Right-handed alpha
Helix 48	AF3	D	632	661	Right-handed alpha
Helix 49	AF4	D	671	677	Right-handed alpha
Helix 50	AF5	D	688	697	Right-handed alpha
Helix 51	AF6	D	699	712	Right-handed alpha
Helix 52	AF7	D	712	717	Right-handed alpha
Helix 53	AF8	D	720	731	Right-handed alpha
Helix 54	AF9	D	739	749	Right-handed alpha
Helix 55	AG1	D	775	788	Right-handed alpha
Helix 56	AG2	D	791	793	Right-handed 310
Helix 57	AG3	D	794	799	Right-handed alpha
Helix 58	AG4	D	816	845	Right-handed alpha

There are 17 sheets in PDB entry 9MZO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	436	437	first strand
Strand 2	A	481	482	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	446	first strand
Strand 2	A	459	460	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	513	514	first strand
Strand 2	A	766	767	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	681	683	first strand
Strand 2	A	733	738	parallel
Strand 3	A	535	543	anti-parallel
Strand 4	A	752	755	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	681	683	first strand
Strand 2	A	733	738	parallel
Strand 3	A	535	543	anti-parallel
Strand 4	A	761	763	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	433	435	first strand
Strand 2	B	478	480	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	446	first strand
Strand 2	B	459	460	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	528	529	first strand
Strand 2	B	767	768	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	534	536	first strand
Strand 2	B	762	764	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	682	683	first strand
Strand 2	B	734	738	parallel
Strand 3	B	538	543	anti-parallel
Strand 4	B	752	754	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	433	437	first strand
Strand 2	C	478	482	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	490	491	first strand
Strand 2	C	498	499	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	513	514	first strand
Strand 2	C	766	767	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	682	684	first strand
Strand 2	C	734	738	parallel
Strand 3	C	535	543	anti-parallel
Strand 4	C	752	755	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	682	684	first strand
Strand 2	C	734	738	parallel
Strand 3	C	535	543	anti-parallel
Strand 4	C	761	763	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	513	519	first strand
Strand 2	D	762	767	anti-parallel
Strand 3	D	535	536	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	682	683	first strand
Strand 2	D	734	738	parallel
Strand 3	D	538	543	anti-parallel
Strand 4	D	752	755	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MZO

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MZO