Analysis of interatomic Contacts of Structural Units in PDB entry:
9MZR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MZR entry

There are 4 chains in PDB entry 9MZR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 429	LYS 845
B	ARG 431	SER 846
C	ARG 431	LYS 848
D	LEU 433	SER 846

There are 60 helices in PDB entry 9MZR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	455	457	Right-handed 310
Helix 2	AA2	A	461	474	Right-handed alpha
Helix 3	AA3	A	500	505	Right-handed alpha
Helix 4	AA4	A	520	527	Right-handed alpha
Helix 5	AA5	A	553	557	Right-handed 310
Helix 6	AA6	A	560	582	Right-handed alpha
Helix 7	AA7	A	630	659	Right-handed alpha
Helix 8	AA8	A	688	696	Right-handed alpha
Helix 9	AA9	A	703	705	Right-handed 310
Helix 10	AB1	A	706	712	Right-handed alpha
Helix 11	AB2	A	720	731	Right-handed alpha
Helix 12	AB3	A	738	749	Right-handed alpha
Helix 13	AB4	A	776	788	Right-handed alpha
Helix 14	AB5	A	789	798	Right-handed alpha
Helix 15	AB6	A	820	836	Right-handed alpha
Helix 16	AB7	A	837	845	Right-handed alpha
Helix 17	AB8	B	455	459	Right-handed 310
Helix 18	AB9	B	461	471	Right-handed alpha
Helix 19	AC1	B	500	505	Right-handed alpha
Helix 20	AC2	B	520	525	Right-handed alpha
Helix 21	AC3	B	560	584	Right-handed alpha
Helix 22	AC4	B	634	657	Right-handed alpha
Helix 23	AC5	B	672	677	Right-handed alpha
Helix 24	AC6	B	688	696	Right-handed alpha
Helix 25	AC7	B	699	712	Right-handed alpha
Helix 26	AC8	B	720	730	Right-handed alpha
Helix 27	AC9	B	739	746	Right-handed alpha
Helix 28	AD1	B	773	788	Right-handed alpha
Helix 29	AD2	B	790	799	Right-handed alpha
Helix 30	AD3	B	816	845	Right-handed alpha
Helix 31	AD4	C	461	474	Right-handed alpha
Helix 32	AD5	C	500	507	Right-handed alpha
Helix 33	AD6	C	520	527	Right-handed alpha
Helix 34	AD7	C	553	557	Right-handed 310
Helix 35	AD8	C	562	585	Right-handed alpha
Helix 36	AD9	C	630	662	Right-handed alpha
Helix 37	AE1	C	670	675	Right-handed alpha
Helix 38	AE2	C	688	696	Right-handed alpha
Helix 39	AE3	C	701	706	Right-handed alpha
Helix 40	AE4	C	706	712	Right-handed alpha
Helix 41	AE5	C	720	727	Right-handed alpha
Helix 42	AE6	C	738	746	Right-handed alpha
Helix 43	AE7	C	773	788	Right-handed alpha
Helix 44	AE8	C	789	799	Right-handed alpha
Helix 45	AE9	C	816	848	Right-handed alpha
Helix 46	AF1	D	454	457	Right-handed 310
Helix 47	AF2	D	461	474	Right-handed alpha
Helix 48	AF3	D	500	507	Right-handed alpha
Helix 49	AF4	D	520	525	Right-handed alpha
Helix 50	AF5	D	560	581	Right-handed alpha
Helix 51	AF6	D	630	659	Right-handed alpha
Helix 52	AF7	D	671	676	Right-handed 310
Helix 53	AF8	D	688	697	Right-handed alpha
Helix 54	AF9	D	699	712	Right-handed alpha
Helix 55	AG1	D	720	730	Right-handed alpha
Helix 56	AG2	D	739	749	Right-handed alpha
Helix 57	AG3	D	773	788	Right-handed alpha
Helix 58	AG4	D	790	799	Right-handed alpha
Helix 59	AG5	D	816	821	Right-handed alpha
Helix 60	AG6	D	821	845	Right-handed alpha

There are 18 sheets in PDB entry 9MZR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	433	437	first strand
Strand 2	A	478	482	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	446	first strand
Strand 2	A	459	460	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	513	514	first strand
Strand 2	A	766	768	anti-parallel
Strand 3	A	528	529	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	541	543	first strand
Strand 2	A	752	754	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	681	683	first strand
Strand 2	A	733	735	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	433	437	first strand
Strand 2	B	478	482	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	513	518	first strand
Strand 2	B	761	767	anti-parallel
Strand 3	B	535	543	anti-parallel
Strand 4	B	734	738	anti-parallel
Strand 5	B	682	684	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	513	518	first strand
Strand 2	B	761	767	anti-parallel
Strand 3	B	535	543	anti-parallel
Strand 4	B	752	754	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	432	435	first strand
Strand 2	C	477	480	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	445	446	first strand
Strand 2	C	459	460	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	513	514	first strand
Strand 2	C	766	768	anti-parallel
Strand 3	C	528	529	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	541	543	first strand
Strand 2	C	752	754	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	682	683	first strand
Strand 2	C	734	735	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	435	436	first strand
Strand 2	D	512	513	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	445	446	first strand
Strand 2	D	459	460	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	528	529	first strand
Strand 2	D	767	768	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	717	718	first strand
Strand 2	D	682	685	parallel
Strand 3	D	734	738	parallel
Strand 4	D	535	543	anti-parallel
Strand 5	D	752	755	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	717	718	first strand
Strand 2	D	682	685	parallel
Strand 3	D	734	738	parallel
Strand 4	D	535	543	anti-parallel
Strand 5	D	761	763	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MZR

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MZR