Analysis of interatomic Contacts of Structural Units in PDB entry:
9N00


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9N00 entry

There is 1 chain in PDB entry 9N00 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 9PRO 1523
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 89 helices in PDB entry 9N00. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 29Right-handed alpha
Helix 2
AA2
A
78 90Right-handed alpha
Helix 3
AA3
A
103 115Right-handed alpha
Helix 4
AA4
A
118 126Right-handed alpha
Helix 5
AA5
A
127 145Right-handed alpha
Helix 6
AA6
A
149 156Right-handed alpha
Helix 7
AA7
A
164 178Right-handed alpha
Helix 8
AA8
A
182 197Right-handed alpha
Helix 9
AA9
A
216 226Right-handed alpha
Helix 10
AB1
A
235 248Right-handed alpha
Helix 11
AB2
A
265 276Right-handed alpha
Helix 12
AB3
A
290 309Right-handed alpha
Helix 13
AB4
A
320 323Right-handed 310
Helix 14
AB5
A
339 348Right-handed alpha
Helix 15
AB6
A
359 366Right-handed alpha
Helix 16
AB7
A
368 385Right-handed alpha
Helix 17
AB8
A
395 402Right-handed alpha
Helix 18
AB9
A
402 407Right-handed alpha
Helix 19
AC1
A
424 433Right-handed alpha
Helix 20
AC2
A
440 447Right-handed alpha
Helix 21
AC3
A
449 464Right-handed alpha
Helix 22
AC4
A
470 483Right-handed alpha
Helix 23
AC5
A
490 508Right-handed alpha
Helix 24
AC6
A
515 517Right-handed 310
Helix 25
AC7
A
520 530Right-handed alpha
Helix 26
AC8
A
546 560Right-handed alpha
Helix 27
AC9
A
563 571Right-handed alpha
Helix 28
AD1
A
574 576Right-handed 310
Helix 29
AD2
A
577 590Right-handed alpha
Helix 30
AD3
A
592 605Right-handed alpha
Helix 31
AD4
A
609 622Right-handed alpha
Helix 32
AD5
A
626 628Right-handed 310
Helix 33
AD6
A
629 640Right-handed alpha
Helix 34
AD7
A
640 651Right-handed alpha
Helix 35
AD8
A
653 671Right-handed alpha
Helix 36
AD9
A
673 684Right-handed alpha
Helix 37
AE1
A
685 688Right-handed 310
Helix 38
AE2
A
692 705Right-handed alpha
Helix 39
AE3
A
709 722Right-handed alpha
Helix 40
AE4
A
725 731Right-handed 310
Helix 41
AE5
A
732 740Right-handed alpha
Helix 42
AE6
A
749 760Right-handed alpha
Helix 43
AE7
A
764 774Right-handed alpha
Helix 44
AE8
A
777 783Right-handed alpha
Helix 45
AE9
A
786 790Right-handed 310
Helix 46
AF1
A
793 798Right-handed alpha
Helix 47
AF2
A
803 812Right-handed alpha
Helix 48
AF3
A
812 828Right-handed alpha
Helix 49
AF4
A
866 881Right-handed alpha
Helix 50
AF5
A
882 884Right-handed 310
Helix 51
AF6
A
885 897Right-handed alpha
Helix 52
AF7
A
900 914Right-handed alpha
Helix 53
AF8
A
915 917Right-handed 310
Helix 54
AF9
A
918 928Right-handed alpha
Helix 55
AG1
A
928 933Right-handed alpha
Helix 56
AG2
A
936 948Right-handed alpha
Helix 57
AG3
A
952 965Right-handed alpha
Helix 58
AG4
A
975 987Right-handed alpha
Helix 59
AG5
A
990 994Right-handed 310
Helix 60
AG6
A
995 1009Right-handed alpha
Helix 61
AG7
A
1067 1079Right-handed alpha
Helix 62
AG8
A
1079 1090Right-handed alpha
Helix 63
AG9
A
1091 1094Right-handed 310
Helix 64
AH1
A
1095 1114Right-handed alpha
Helix 65
AH2
A
1131 1145Right-handed alpha
Helix 66
AH3
A
1145 1150Right-handed alpha
Helix 67
AH4
A
1152 1164Right-handed alpha
Helix 68
AH5
A
1168 1181Right-handed alpha
Helix 69
AH6
A
1198 1203Right-handed alpha
Helix 70
AH7
A
1205 1224Right-handed alpha
Helix 71
AH8
A
1231 1241Right-handed alpha
Helix 72
AH9
A
1244 1262Right-handed alpha
Helix 73
AI1
A
1262 1274Right-handed alpha
Helix 74
AI2
A
1280 1292Right-handed alpha
Helix 75
AI3
A
1295 1309Right-handed alpha
Helix 76
AI4
A
1313 1328Right-handed alpha
Helix 77
AI5
A
1332 1344Right-handed alpha
Helix 78
AI6
A
1345 1357Right-handed alpha
Helix 79
AI7
A
1358 1365Right-handed alpha
Helix 80
AI8
A
1365 1378Right-handed alpha
Helix 81
AI9
A
1380 1392Right-handed alpha
Helix 82
AJ1
A
1393 1396Right-handed 310
Helix 83
AJ2
A
1405 1419Right-handed alpha
Helix 84
AJ3
A
1431 1440Right-handed alpha
Helix 85
AJ4
A
1443 1462Right-handed alpha
Helix 86
AJ5
A
1467 1469Right-handed 310
Helix 87
AJ6
A
1470 1491Right-handed alpha
Helix 88
AJ7
A
1492 1508Right-handed alpha
Helix 89
AJ8
A
1510 1521Right-handed alpha
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There are 4 sheets in PDB entry 9N00. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 161first strand
Strand 2
A
93 99parallel
Strand 3
A
56 62parallel
Strand 4
A
47 51anti-parallel
Strand 5
A
32 37anti-parallel
Strand 6
A
213 215anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 318first strand
Strand 2
A
352 358parallel
Strand 3
A
388 394parallel
Strand 4
A
280 284parallel
Strand 5
A
412 415parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 333first strand
Strand 2
A
336 337anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
512 513first strand
Strand 2
A
540 543anti-parallel
Strand 3
A
533 535anti-parallel
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