Analysis of interatomic Contacts of Structural Units in PDB entry:
9N0L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9N0L entry

There are 4 chains in PDB entry 9N0L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 172	PHE 651
C	LEU 172	PHE 651
D	LEU 172	PHE 651
B	LEU 172	PHE 651

There are 76 helices in PDB entry 9N0L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	183	189	Right-handed alpha
Helix 2	AA2	A	192	214	Right-handed alpha
Helix 3	AA3	A	231	241	Right-handed alpha
Helix 4	AA4	A	243	256	Right-handed alpha
Helix 5	AA5	A	272	290	Right-handed alpha
Helix 6	AA6	A	321	337	Right-handed alpha
Helix 7	AA7	A	350	366	Right-handed alpha
Helix 8	AA8	A	382	396	Right-handed alpha
Helix 9	AA9	A	403	409	Right-handed alpha
Helix 10	AB1	A	423	427	Right-handed 310
Helix 11	AB2	A	429	436	Right-handed alpha
Helix 12	AB3	A	466	479	Right-handed alpha
Helix 13	AB4	A	485	501	Right-handed alpha
Helix 14	AB5	A	508	521	Right-handed alpha
Helix 15	AB6	A	524	533	Right-handed alpha
Helix 16	AB7	A	535	548	Right-handed alpha
Helix 17	AB8	A	568	581	Right-handed alpha
Helix 18	AB9	A	610	619	Right-handed alpha
Helix 19	AC1	A	635	651	Right-handed alpha
Helix 20	AC2	C	183	189	Right-handed alpha
Helix 21	AC3	C	192	215	Right-handed alpha
Helix 22	AC4	C	232	241	Right-handed alpha
Helix 23	AC5	C	243	256	Right-handed alpha
Helix 24	AC6	C	272	290	Right-handed alpha
Helix 25	AC7	C	321	337	Right-handed alpha
Helix 26	AC8	C	350	366	Right-handed alpha
Helix 27	AC9	C	382	396	Right-handed alpha
Helix 28	AD1	C	403	409	Right-handed alpha
Helix 29	AD2	C	423	427	Right-handed 310
Helix 30	AD3	C	429	436	Right-handed alpha
Helix 31	AD4	C	466	479	Right-handed alpha
Helix 32	AD5	C	485	501	Right-handed alpha
Helix 33	AD6	C	508	521	Right-handed alpha
Helix 34	AD7	C	524	532	Right-handed alpha
Helix 35	AD8	C	535	548	Right-handed alpha
Helix 36	AD9	C	568	582	Right-handed alpha
Helix 37	AE1	C	610	618	Right-handed alpha
Helix 38	AE2	C	635	651	Right-handed alpha
Helix 39	AE3	D	183	189	Right-handed alpha
Helix 40	AE4	D	192	214	Right-handed alpha
Helix 41	AE5	D	232	241	Right-handed alpha
Helix 42	AE6	D	243	256	Right-handed alpha
Helix 43	AE7	D	272	290	Right-handed alpha
Helix 44	AE8	D	320	337	Right-handed alpha
Helix 45	AE9	D	350	366	Right-handed alpha
Helix 46	AF1	D	382	396	Right-handed alpha
Helix 47	AF2	D	402	409	Right-handed alpha
Helix 48	AF3	D	423	427	Right-handed 310
Helix 49	AF4	D	429	435	Right-handed alpha
Helix 50	AF5	D	466	479	Right-handed alpha
Helix 51	AF6	D	485	501	Right-handed alpha
Helix 52	AF7	D	508	522	Right-handed alpha
Helix 53	AF8	D	524	532	Right-handed alpha
Helix 54	AF9	D	535	548	Right-handed alpha
Helix 55	AG1	D	568	581	Right-handed alpha
Helix 56	AG2	D	610	618	Right-handed alpha
Helix 57	AG3	D	635	651	Right-handed alpha
Helix 58	AG4	B	183	189	Right-handed alpha
Helix 59	AG5	B	192	214	Right-handed alpha
Helix 60	AG6	B	232	241	Right-handed alpha
Helix 61	AG7	B	243	256	Right-handed alpha
Helix 62	AG8	B	272	290	Right-handed alpha
Helix 63	AG9	B	320	337	Right-handed alpha
Helix 64	AH1	B	350	365	Right-handed alpha
Helix 65	AH2	B	382	396	Right-handed alpha
Helix 66	AH3	B	402	409	Right-handed alpha
Helix 67	AH4	B	423	427	Right-handed 310
Helix 68	AH5	B	429	435	Right-handed alpha
Helix 69	AH6	B	466	479	Right-handed alpha
Helix 70	AH7	B	485	500	Right-handed alpha
Helix 71	AH8	B	508	522	Right-handed alpha
Helix 72	AH9	B	524	532	Right-handed alpha
Helix 73	AI1	B	535	548	Right-handed alpha
Helix 74	AI2	B	568	582	Right-handed alpha
Helix 75	AI3	B	610	618	Right-handed alpha
Helix 76	AI4	B	635	651	Right-handed alpha

There are 12 sheets in PDB entry 9N0L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	217	220	first strand
Strand 2	A	225	230	anti-parallel
Strand 3	A	175	182	anti-parallel
Strand 4	A	261	268	anti-parallel
Strand 5	A	294	299	parallel
Strand 6	A	306	310	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	400	402	first strand
Strand 2	A	372	376	parallel
Strand 3	A	340	344	parallel
Strand 4	A	414	419	parallel
Strand 5	A	439	443	parallel
Strand 6	A	455	460	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	549	550	first strand
Strand 2	A	556	560	anti-parallel
Strand 3	A	587	593	parallel
Strand 4	A	598	605	anti-parallel
Strand 5	A	626	632	anti-parallel
Strand 6	A	621	622	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	217	220	first strand
Strand 2	C	225	231	anti-parallel
Strand 3	C	174	182	anti-parallel
Strand 4	C	261	268	anti-parallel
Strand 5	C	294	299	parallel
Strand 6	C	307	310	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	400	402	first strand
Strand 2	C	372	376	parallel
Strand 3	C	341	344	parallel
Strand 4	C	415	419	parallel
Strand 5	C	439	443	parallel
Strand 6	C	455	460	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	549	550	first strand
Strand 2	C	556	560	anti-parallel
Strand 3	C	587	593	parallel
Strand 4	C	598	605	anti-parallel
Strand 5	C	626	632	anti-parallel
Strand 6	C	621	622	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	217	222	first strand
Strand 2	D	225	231	anti-parallel
Strand 3	D	174	181	anti-parallel
Strand 4	D	262	268	anti-parallel
Strand 5	D	295	299	parallel
Strand 6	D	307	309	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	400	401	first strand
Strand 2	D	372	375	parallel
Strand 3	D	340	344	parallel
Strand 4	D	414	419	parallel
Strand 5	D	439	443	parallel
Strand 6	D	455	460	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	549	553	first strand
Strand 2	D	556	560	anti-parallel
Strand 3	D	587	595	parallel
Strand 4	D	598	605	anti-parallel
Strand 5	D	626	632	anti-parallel
Strand 6	D	621	623	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	217	222	first strand
Strand 2	B	225	231	anti-parallel
Strand 3	B	174	181	anti-parallel
Strand 4	B	262	268	anti-parallel
Strand 5	B	295	299	parallel
Strand 6	B	307	309	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	399	401	first strand
Strand 2	B	372	375	parallel
Strand 3	B	340	344	parallel
Strand 4	B	414	419	parallel
Strand 5	B	439	443	parallel
Strand 6	B	455	460	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	549	553	first strand
Strand 2	B	556	560	anti-parallel
Strand 3	B	587	593	parallel
Strand 4	B	598	605	anti-parallel
Strand 5	B	626	632	anti-parallel
Strand 6	B	621	623	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9N0L

Analysis of interatomic Contacts of Structural Units in PDB entry:
9N0L