Analysis of interatomic Contacts of Structural Units in PDB entry:
9N0N

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9N0N entry

There are 4 chains in PDB entry 9N0N (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 373	ALA 917
B	THR 25	VAL 911
C	THR 25	VAL 911
D	VAL 376	ALA 917

There are121 helices in PDB entry 9N0N. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	378	392	Right-handed alpha
Helix 2	AA2	A	406	416	Right-handed alpha
Helix 3	AA3	A	437	451	Right-handed alpha
Helix 4	AA4	A	453	457	Right-handed 310
Helix 5	AA5	A	473	485	Right-handed alpha
Helix 6	AA6	A	497	502	Right-handed 310
Helix 7	AA7	A	506	509	Right-handed 310
Helix 8	AA8	A	510	524	Right-handed alpha
Helix 9	AA9	A	524	538	Right-handed alpha
Helix 10	AB1	A	542	549	Right-handed 310
Helix 11	AB2	A	568	573	Right-handed alpha
Helix 12	AB3	A	587	592	Right-handed alpha
Helix 13	AB4	A	592	604	Right-handed alpha
Helix 14	AB5	A	609	615	Right-handed alpha
Helix 15	AB6	A	623	648	Right-handed alpha
Helix 16	AB7	A	648	655	Right-handed alpha
Helix 17	AB8	A	659	664	Right-handed alpha
Helix 18	AB9	A	665	669	Right-handed 310
Helix 19	AC1	A	687	694	Right-handed alpha
Helix 20	AC2	A	713	722	Right-handed alpha
Helix 21	AC3	A	747	772	Right-handed alpha
Helix 22	AC4	A	776	788	Right-handed alpha
Helix 23	AC5	A	801	805	Right-handed 310
Helix 24	AC6	A	814	822	Right-handed alpha
Helix 25	AC7	A	832	842	Right-handed alpha
Helix 26	AC8	A	869	877	Right-handed alpha
Helix 27	AC9	A	897	915	Right-handed alpha
Helix 28	AD1	B	26	47	Right-handed alpha
Helix 29	AD2	B	50	66	Right-handed alpha
Helix 30	AD3	B	67	71	Right-handed 310
Helix 31	AD4	B	75	88	Right-handed alpha
Helix 32	AD5	B	90	108	Right-handed alpha
Helix 33	AD6	B	109	112	Right-handed 310
Helix 34	AD7	B	177	183	Right-handed 310
Helix 35	AD8	B	228	235	Right-handed alpha
Helix 36	AD9	B	379	392	Right-handed alpha
Helix 37	AE1	B	405	416	Right-handed alpha
Helix 38	AE2	B	437	452	Right-handed alpha
Helix 39	AE3	B	453	455	Right-handed 310
Helix 40	AE4	B	473	485	Right-handed alpha
Helix 41	AE5	B	503	510	Right-handed alpha
Helix 42	AE6	B	510	524	Right-handed alpha
Helix 43	AE7	B	524	539	Right-handed alpha
Helix 44	AE8	B	540	541	Right-handed 310
Helix 45	AE9	B	542	549	Right-handed 310
Helix 46	AF1	B	587	592	Right-handed alpha
Helix 47	AF2	B	592	604	Right-handed alpha
Helix 48	AF3	B	616	629	Right-handed alpha
Helix 49	AF4	B	629	648	Right-handed alpha
Helix 50	AF5	B	648	655	Right-handed alpha
Helix 51	AF6	B	659	664	Right-handed alpha
Helix 52	AF7	B	665	669	Right-handed 310
Helix 53	AF8	B	689	694	Right-handed alpha
Helix 54	AF9	B	708	711	Right-handed 310
Helix 55	AG1	B	713	721	Right-handed alpha
Helix 56	AG2	B	747	772	Right-handed alpha
Helix 57	AG3	B	774	790	Right-handed alpha
Helix 58	AG4	B	814	822	Right-handed alpha
Helix 59	AG5	B	823	826	Right-handed 310
Helix 60	AG6	B	832	842	Right-handed alpha
Helix 61	AG7	B	869	879	Right-handed alpha
Helix 62	AG8	B	897	910	Right-handed alpha
Helix 63	AG9	C	26	45	Right-handed alpha
Helix 64	AH1	C	50	66	Right-handed alpha
Helix 65	AH2	C	67	71	Right-handed 310
Helix 66	AH3	C	76	88	Right-handed alpha
Helix 67	AH4	C	90	108	Right-handed alpha
Helix 68	AH5	C	274	278	Right-handed alpha
Helix 69	AH6	C	379	392	Right-handed alpha
Helix 70	AH7	C	405	416	Right-handed alpha
Helix 71	AH8	C	437	451	Right-handed alpha
Helix 72	AH9	C	453	457	Right-handed 310
Helix 73	AI1	C	473	483	Right-handed alpha
Helix 74	AI2	C	497	501	Right-handed 310
Helix 75	AI3	C	503	510	Right-handed alpha
Helix 76	AI4	C	510	524	Right-handed alpha
Helix 77	AI5	C	524	539	Right-handed alpha
Helix 78	AI6	C	542	547	Right-handed alpha
Helix 79	AI7	C	587	592	Right-handed alpha
Helix 80	AI8	C	592	604	Right-handed alpha
Helix 81	AI9	C	611	627	Right-handed alpha
Helix 82	AJ1	C	629	649	Right-handed alpha
Helix 83	AJ2	C	650	655	Right-handed alpha
Helix 84	AJ3	C	659	664	Right-handed alpha
Helix 85	AJ4	C	687	694	Right-handed alpha
Helix 86	AJ5	C	708	711	Right-handed 310
Helix 87	AJ6	C	713	722	Right-handed alpha
Helix 88	AJ7	C	747	772	Right-handed alpha
Helix 89	AJ8	C	773	790	Right-handed alpha
Helix 90	AJ9	C	814	822	Right-handed alpha
Helix 91	AK1	C	823	826	Right-handed 310
Helix 92	AK2	C	832	842	Right-handed alpha
Helix 93	AK3	C	869	879	Right-handed alpha
Helix 94	AK4	C	897	910	Right-handed alpha
Helix 95	AK5	D	379	392	Right-handed alpha
Helix 96	AK6	D	405	414	Right-handed alpha
Helix 97	AK7	D	415	417	Right-handed 310
Helix 98	AK8	D	437	451	Right-handed alpha
Helix 99	AK9	D	453	455	Right-handed 310
Helix 100	AL1	D	473	485	Right-handed alpha
Helix 101	AL2	D	497	502	Right-handed 310
Helix 102	AL3	D	506	509	Right-handed 310
Helix 103	AL4	D	510	524	Right-handed alpha
Helix 104	AL5	D	524	539	Right-handed alpha
Helix 105	AL6	D	542	549	Right-handed 310
Helix 106	AL7	D	587	592	Right-handed alpha
Helix 107	AL8	D	592	604	Right-handed alpha
Helix 108	AL9	D	617	621	Right-handed 310
Helix 109	AM1	D	624	648	Right-handed alpha
Helix 110	AM2	D	650	655	Right-handed alpha
Helix 111	AM3	D	659	664	Right-handed alpha
Helix 112	AM4	D	665	669	Right-handed 310
Helix 113	AM5	D	687	694	Right-handed alpha
Helix 114	AM6	D	708	711	Right-handed 310
Helix 115	AM7	D	713	721	Right-handed alpha
Helix 116	AM8	D	747	771	Right-handed alpha
Helix 117	AM9	D	773	787	Right-handed alpha
Helix 118	AN1	D	814	822	Right-handed alpha
Helix 119	AN2	D	832	843	Right-handed alpha
Helix 120	AN3	D	869	879	Right-handed alpha
Helix 121	AN4	D	897	915	Right-handed alpha

There are 20 sheets in PDB entry 9N0N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	374	376	first strand
Strand 2	A	579	585	anti-parallel
Strand 3	A	561	567	anti-parallel
Strand 4	A	489	493	parallel
Strand 5	A	459	463	parallel
Strand 6	A	397	401	parallel
Strand 7	A	418	422	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	426	427	first strand
Strand 2	A	432	433	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	470	471	first strand
Strand 2	A	697	698	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	656	657	first strand
Strand 2	A	702	706	anti-parallel
Strand 3	A	737	741	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	828	831	first strand
Strand 2	A	893	896	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	139	142	first strand
Strand 2	B	169	172	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	418	422	first strand
Strand 2	B	397	401	parallel
Strand 3	B	457	462	parallel
Strand 4	B	489	493	parallel
Strand 5	B	561	565	parallel
Strand 6	B	581	585	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	470	471	first strand
Strand 2	B	697	698	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	656	657	first strand
Strand 2	B	702	706	anti-parallel
Strand 3	B	737	741	anti-parallel
Strand 4	B	730	733	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	828	831	first strand
Strand 2	B	893	896	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	853	854	first strand
Strand 2	B	884	885	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	372	376	first strand
Strand 2	C	579	585	anti-parallel
Strand 3	C	561	567	anti-parallel
Strand 4	C	489	493	parallel
Strand 5	C	459	463	parallel
Strand 6	C	397	401	parallel
Strand 7	C	418	422	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	470	472	first strand
Strand 2	C	696	698	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	656	657	first strand
Strand 2	C	702	706	anti-parallel
Strand 3	C	737	741	anti-parallel
Strand 4	C	730	733	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	828	831	first strand
Strand 2	C	893	896	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	418	422	first strand
Strand 2	D	397	401	parallel
Strand 3	D	457	463	parallel
Strand 4	D	489	493	parallel
Strand 5	D	561	566	parallel
Strand 6	D	580	585	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	426	427	first strand
Strand 2	D	432	433	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	470	472	first strand
Strand 2	D	696	698	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	656	657	first strand
Strand 2	D	702	706	anti-parallel
Strand 3	D	737	741	anti-parallel
Strand 4	D	732	733	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	828	831	first strand
Strand 2	D	893	896	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9N0N

Analysis of interatomic Contacts of Structural Units in PDB entry:
9N0N