Analysis of interatomic Contacts of Structural Units in PDB entry:
9N0O

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9N0O entry

There are 2 chains in PDB entry 9N0O (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 15	ALA 910
B	ALA 15	ALA 910

There are 79 helices in PDB entry 9N0O. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	19	Right-handed 310
Helix 2	AA2	A	21	24	Right-handed 310
Helix 3	AA3	A	25	46	Right-handed alpha
Helix 4	AA4	A	50	66	Right-handed alpha
Helix 5	AA5	A	67	71	Right-handed 310
Helix 6	AA6	A	74	88	Right-handed alpha
Helix 7	AA7	A	90	109	Right-handed alpha
Helix 8	AA8	A	110	114	Right-handed 310
Helix 9	AA9	A	152	160	Right-handed alpha
Helix 10	AB1	A	175	186	Right-handed alpha
Helix 11	AB2	A	229	239	Right-handed alpha
Helix 12	AB3	A	272	289	Right-handed alpha
Helix 13	AB4	A	290	301	Right-handed alpha
Helix 14	AB5	A	355	368	Right-handed alpha
Helix 15	AB6	A	379	392	Right-handed alpha
Helix 16	AB7	A	405	416	Right-handed alpha
Helix 17	AB8	A	437	451	Right-handed alpha
Helix 18	AB9	A	473	485	Right-handed alpha
Helix 19	AC1	A	495	502	Right-handed 310
Helix 20	AC2	A	503	508	Right-handed alpha
Helix 21	AC3	A	510	524	Right-handed alpha
Helix 22	AC4	A	524	538	Right-handed alpha
Helix 23	AC5	A	542	548	Right-handed 310
Helix 24	AC6	A	568	572	Right-handed alpha
Helix 25	AC7	A	591	604	Right-handed alpha
Helix 26	AC8	A	609	625	Right-handed alpha
Helix 27	AC9	A	626	648	Right-handed alpha
Helix 28	AD1	A	648	653	Right-handed alpha
Helix 29	AD2	A	659	664	Right-handed alpha
Helix 30	AD3	A	665	669	Right-handed 310
Helix 31	AD4	A	685	694	Right-handed alpha
Helix 32	AD5	A	708	711	Right-handed 310
Helix 33	AD6	A	713	721	Right-handed alpha
Helix 34	AD7	A	721	727	Right-handed alpha
Helix 35	AD8	A	747	772	Right-handed alpha
Helix 36	AD9	A	773	789	Right-handed alpha
Helix 37	AE1	A	814	822	Right-handed alpha
Helix 38	AE2	A	832	843	Right-handed alpha
Helix 39	AE3	A	869	878	Right-handed alpha
Helix 40	AE4	A	897	910	Right-handed alpha
Helix 41	AE5	B	15	19	Right-handed 310
Helix 42	AE6	B	25	46	Right-handed alpha
Helix 43	AE7	B	50	65	Right-handed alpha
Helix 44	AE8	B	66	71	Right-handed 310
Helix 45	AE9	B	74	88	Right-handed alpha
Helix 46	AF1	B	90	108	Right-handed alpha
Helix 47	AF2	B	110	114	Right-handed 310
Helix 48	AF3	B	152	160	Right-handed alpha
Helix 49	AF4	B	175	186	Right-handed alpha
Helix 50	AF5	B	229	239	Right-handed alpha
Helix 51	AF6	B	272	289	Right-handed alpha
Helix 52	AF7	B	290	301	Right-handed alpha
Helix 53	AF8	B	355	368	Right-handed alpha
Helix 54	AF9	B	378	392	Right-handed alpha
Helix 55	AG1	B	405	416	Right-handed alpha
Helix 56	AG2	B	437	451	Right-handed alpha
Helix 57	AG3	B	473	485	Right-handed alpha
Helix 58	AG4	B	495	502	Right-handed 310
Helix 59	AG5	B	503	508	Right-handed alpha
Helix 60	AG6	B	510	524	Right-handed alpha
Helix 61	AG7	B	524	538	Right-handed alpha
Helix 62	AG8	B	543	548	Right-handed 310
Helix 63	AG9	B	568	572	Right-handed alpha
Helix 64	AH1	B	592	604	Right-handed alpha
Helix 65	AH2	B	609	625	Right-handed alpha
Helix 66	AH3	B	626	648	Right-handed alpha
Helix 67	AH4	B	648	653	Right-handed alpha
Helix 68	AH5	B	659	664	Right-handed alpha
Helix 69	AH6	B	665	669	Right-handed 310
Helix 70	AH7	B	685	694	Right-handed alpha
Helix 71	AH8	B	708	711	Right-handed 310
Helix 72	AH9	B	713	721	Right-handed alpha
Helix 73	AI1	B	721	727	Right-handed alpha
Helix 74	AI2	B	747	772	Right-handed alpha
Helix 75	AI3	B	773	789	Right-handed alpha
Helix 76	AI4	B	814	822	Right-handed alpha
Helix 77	AI5	B	832	843	Right-handed alpha
Helix 78	AI6	B	869	878	Right-handed alpha
Helix 79	AI7	B	897	910	Right-handed alpha

There are 12 sheets in PDB entry 9N0O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	166	173	first strand
Strand 2	A	134	141	parallel
Strand 3	A	189	195	parallel
Strand 4	A	243	247	parallel
Strand 5	A	266	267	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	372	376	first strand
Strand 2	A	579	585	anti-parallel
Strand 3	A	561	567	anti-parallel
Strand 4	A	489	493	parallel
Strand 5	A	459	462	parallel
Strand 6	A	397	401	parallel
Strand 7	A	418	422	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	470	472	first strand
Strand 2	A	696	698	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	656	657	first strand
Strand 2	A	702	706	anti-parallel
Strand 3	A	737	741	anti-parallel
Strand 4	A	732	733	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	828	831	first strand
Strand 2	A	893	896	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	853	854	first strand
Strand 2	A	884	885	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	166	173	first strand
Strand 2	B	134	141	parallel
Strand 3	B	189	195	parallel
Strand 4	B	243	247	parallel
Strand 5	B	266	267	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	372	376	first strand
Strand 2	B	579	585	anti-parallel
Strand 3	B	561	567	anti-parallel
Strand 4	B	489	493	parallel
Strand 5	B	459	462	parallel
Strand 6	B	397	401	parallel
Strand 7	B	418	422	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	470	472	first strand
Strand 2	B	696	698	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	656	657	first strand
Strand 2	B	702	706	anti-parallel
Strand 3	B	737	741	anti-parallel
Strand 4	B	732	733	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	828	831	first strand
Strand 2	B	893	896	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	853	854	first strand
Strand 2	B	884	885	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9N0O

Analysis of interatomic Contacts of Structural Units in PDB entry:
9N0O