Analysis of interatomic Contacts of Structural Units in PDB entry:
9N0P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9N0P entry

There are 4 chains in PDB entry 9N0P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ALA 360	ALA 917
C	ILE 357	ALA 917
A	SER 23	ALA 917
D	PRO 22	ALA 917

There are129 helices in PDB entry 9N0P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	360	369	Right-handed alpha
Helix 2	AA2	B	379	392	Right-handed alpha
Helix 3	AA3	B	405	416	Right-handed alpha
Helix 4	AA4	B	437	452	Right-handed alpha
Helix 5	AA5	B	453	455	Right-handed 310
Helix 6	AA6	B	473	482	Right-handed alpha
Helix 7	AA7	B	498	502	Right-handed 310
Helix 8	AA8	B	503	508	Right-handed alpha
Helix 9	AA9	B	510	523	Right-handed alpha
Helix 10	AB1	B	524	539	Right-handed alpha
Helix 11	AB2	B	542	548	Right-handed 310
Helix 12	AB3	B	567	572	Right-handed 310
Helix 13	AB4	B	587	592	Right-handed alpha
Helix 14	AB5	B	592	604	Right-handed alpha
Helix 15	AB6	B	610	648	Right-handed alpha
Helix 16	AB7	B	650	655	Right-handed alpha
Helix 17	AB8	B	659	664	Right-handed alpha
Helix 18	AB9	B	665	669	Right-handed 310
Helix 19	AC1	B	683	694	Right-handed alpha
Helix 20	AC2	B	708	711	Right-handed 310
Helix 21	AC3	B	713	721	Right-handed alpha
Helix 22	AC4	B	747	772	Right-handed alpha
Helix 23	AC5	B	773	788	Right-handed alpha
Helix 24	AC6	B	801	805	Right-handed 310
Helix 25	AC7	B	814	822	Right-handed alpha
Helix 26	AC8	B	832	842	Right-handed alpha
Helix 27	AC9	B	869	879	Right-handed alpha
Helix 28	AD1	B	897	917	Right-handed alpha
Helix 29	AD2	C	358	369	Right-handed alpha
Helix 30	AD3	C	379	392	Right-handed alpha
Helix 31	AD4	C	405	416	Right-handed alpha
Helix 32	AD5	C	437	452	Right-handed alpha
Helix 33	AD6	C	453	457	Right-handed 310
Helix 34	AD7	C	473	483	Right-handed alpha
Helix 35	AD8	C	495	498	Right-handed 310
Helix 36	AD9	C	503	508	Right-handed alpha
Helix 37	AE1	C	510	523	Right-handed alpha
Helix 38	AE2	C	524	538	Right-handed alpha
Helix 39	AE3	C	542	549	Right-handed 310
Helix 40	AE4	C	567	571	Right-handed 310
Helix 41	AE5	C	587	592	Right-handed alpha
Helix 42	AE6	C	592	604	Right-handed alpha
Helix 43	AE7	C	609	626	Right-handed alpha
Helix 44	AE8	C	626	648	Right-handed alpha
Helix 45	AE9	C	650	654	Right-handed 310
Helix 46	AF1	C	659	664	Right-handed alpha
Helix 47	AF2	C	665	669	Right-handed 310
Helix 48	AF3	C	684	694	Right-handed alpha
Helix 49	AF4	C	713	721	Right-handed alpha
Helix 50	AF5	C	747	772	Right-handed alpha
Helix 51	AF6	C	773	789	Right-handed alpha
Helix 52	AF7	C	801	805	Right-handed 310
Helix 53	AF8	C	814	822	Right-handed alpha
Helix 54	AF9	C	832	842	Right-handed alpha
Helix 55	AG1	C	869	877	Right-handed alpha
Helix 56	AG2	C	897	915	Right-handed alpha
Helix 57	AG3	A	26	46	Right-handed alpha
Helix 58	AG4	A	50	66	Right-handed alpha
Helix 59	AG5	A	67	71	Right-handed 310
Helix 60	AG6	A	76	89	Right-handed alpha
Helix 61	AG7	A	90	108	Right-handed alpha
Helix 62	AG8	A	109	115	Right-handed 310
Helix 63	AG9	A	120	129	Right-handed alpha
Helix 64	AH1	A	151	156	Right-handed alpha
Helix 65	AH2	A	157	159	Right-handed 310
Helix 66	AH3	A	175	186	Right-handed alpha
Helix 67	AH4	A	228	239	Right-handed alpha
Helix 68	AH5	A	275	288	Right-handed alpha
Helix 69	AH6	A	359	368	Right-handed alpha
Helix 70	AH7	A	379	392	Right-handed alpha
Helix 71	AH8	A	405	416	Right-handed alpha
Helix 72	AH9	A	437	452	Right-handed alpha
Helix 73	AI1	A	453	455	Right-handed 310
Helix 74	AI2	A	473	485	Right-handed alpha
Helix 75	AI3	A	496	500	Right-handed 310
Helix 76	AI4	A	506	509	Right-handed 310
Helix 77	AI5	A	510	523	Right-handed alpha
Helix 78	AI6	A	524	539	Right-handed alpha
Helix 79	AI7	A	542	548	Right-handed 310
Helix 80	AI8	A	587	592	Right-handed alpha
Helix 81	AI9	A	592	604	Right-handed alpha
Helix 82	AJ1	A	610	615	Right-handed alpha
Helix 83	AJ2	A	616	624	Right-handed alpha
Helix 84	AJ3	A	630	648	Right-handed alpha
Helix 85	AJ4	A	648	655	Right-handed alpha
Helix 86	AJ5	A	708	711	Right-handed 310
Helix 87	AJ6	A	713	722	Right-handed alpha
Helix 88	AJ7	A	723	725	Right-handed 310
Helix 89	AJ8	A	747	772	Right-handed alpha
Helix 90	AJ9	A	773	787	Right-handed alpha
Helix 91	AK1	A	814	822	Right-handed alpha
Helix 92	AK2	A	832	843	Right-handed alpha
Helix 93	AK3	A	869	879	Right-handed alpha
Helix 94	AK4	A	897	916	Right-handed alpha
Helix 95	AK5	D	23	47	Right-handed alpha
Helix 96	AK6	D	50	65	Right-handed alpha
Helix 97	AK7	D	76	89	Right-handed alpha
Helix 98	AK8	D	90	109	Right-handed alpha
Helix 99	AK9	D	110	114	Right-handed 310
Helix 100	AL1	D	121	130	Right-handed alpha
Helix 101	AL2	D	151	158	Right-handed alpha
Helix 102	AL3	D	175	186	Right-handed alpha
Helix 103	AL4	D	230	239	Right-handed alpha
Helix 104	AL5	D	275	288	Right-handed alpha
Helix 105	AL6	D	358	368	Right-handed alpha
Helix 106	AL7	D	379	392	Right-handed alpha
Helix 107	AL8	D	405	416	Right-handed alpha
Helix 108	AL9	D	437	452	Right-handed alpha
Helix 109	AM1	D	453	457	Right-handed 310
Helix 110	AM2	D	473	485	Right-handed alpha
Helix 111	AM3	D	497	503	Right-handed 310
Helix 112	AM4	D	505	509	Right-handed 310
Helix 113	AM5	D	510	523	Right-handed alpha
Helix 114	AM6	D	524	538	Right-handed alpha
Helix 115	AM7	D	542	548	Right-handed 310
Helix 116	AM8	D	587	592	Right-handed alpha
Helix 117	AM9	D	592	602	Right-handed alpha
Helix 118	AN1	D	607	626	Right-handed alpha
Helix 119	AN2	D	629	648	Right-handed alpha
Helix 120	AN3	D	648	655	Right-handed alpha
Helix 121	AN4	D	716	721	Right-handed alpha
Helix 122	AN5	D	721	726	Right-handed alpha
Helix 123	AN6	D	747	772	Right-handed alpha
Helix 124	AN7	D	773	787	Right-handed alpha
Helix 125	AN8	D	801	805	Right-handed 310
Helix 126	AN9	D	814	822	Right-handed alpha
Helix 127	AO1	D	832	843	Right-handed alpha
Helix 128	AO2	D	869	879	Right-handed alpha
Helix 129	AO3	D	897	917	Right-handed alpha

There are 23 sheets in PDB entry 9N0P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	372	376	first strand
Strand 2	B	579	585	anti-parallel
Strand 3	B	561	566	anti-parallel
Strand 4	B	490	493	parallel
Strand 5	B	457	463	parallel
Strand 6	B	397	401	parallel
Strand 7	B	419	422	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	426	427	first strand
Strand 2	B	432	433	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	470	471	first strand
Strand 2	B	697	698	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	656	657	first strand
Strand 2	B	702	706	anti-parallel
Strand 3	B	737	741	anti-parallel
Strand 4	B	732	734	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	828	831	first strand
Strand 2	B	893	896	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	372	376	first strand
Strand 2	C	579	585	anti-parallel
Strand 3	C	561	565	anti-parallel
Strand 4	C	490	493	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	398	401	first strand
Strand 2	C	419	422	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	426	427	first strand
Strand 2	C	432	433	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	470	471	first strand
Strand 2	C	697	698	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	656	657	first strand
Strand 2	C	702	706	anti-parallel
Strand 3	C	737	741	anti-parallel
Strand 4	C	729	730	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	828	831	first strand
Strand 2	C	893	896	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	853	854	first strand
Strand 2	C	884	885	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	166	173	first strand
Strand 2	A	134	141	parallel
Strand 3	A	189	194	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	372	376	first strand
Strand 2	A	579	585	anti-parallel
Strand 3	A	561	565	anti-parallel
Strand 4	A	490	493	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	418	422	first strand
Strand 2	A	397	401	parallel
Strand 3	A	457	461	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	470	471	first strand
Strand 2	A	697	698	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	656	657	first strand
Strand 2	A	702	706	anti-parallel
Strand 3	A	737	741	anti-parallel
Strand 4	A	732	733	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	828	831	first strand
Strand 2	A	893	896	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	168	173	first strand
Strand 2	D	136	141	parallel
Strand 3	D	189	193	parallel
Strand 4	D	243	245	parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	372	376	first strand
Strand 2	D	579	585	anti-parallel
Strand 3	D	561	567	anti-parallel
Strand 4	D	489	493	parallel
Strand 5	D	459	461	parallel
Strand 6	D	397	401	parallel
Strand 7	D	418	422	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	702	706	first strand
Strand 2	D	737	741	anti-parallel
Strand 3	D	732	733	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	828	831	first strand
Strand 2	D	893	896	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	853	854	first strand
Strand 2	D	884	885	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9N0P

Analysis of interatomic Contacts of Structural Units in PDB entry:
9N0P