Analysis of interatomic Contacts of Structural Units in PDB entry:
9N0S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9N0S entry

There are 5 chains in PDB entry 9N0S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 18ASP 1711
B
 HIS 127PRO 182
C
 ASP 126THR 166
D
 HIS 127THR 166
E
 ASP 126THR 166
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 79 helices in PDB entry 9N0S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 41Right-handed alpha
Helix 2
AA2
A
45 55Right-handed alpha
Helix 3
AA3
A
64 71Right-handed alpha
Helix 4
AA4
A
81 99Right-handed alpha
Helix 5
AA5
A
104 118Right-handed alpha
Helix 6
AA6
A
118 139Right-handed alpha
Helix 7
AA7
A
176 203Right-handed alpha
Helix 8
AA8
A
208 220Right-handed alpha
Helix 9
AA9
A
225 235Right-handed alpha
Helix 10
AB1
A
235 249Right-handed alpha
Helix 11
AB2
A
255 259Right-handed 310
Helix 12
AB3
A
261 266Right-handed alpha
Helix 13
AB4
A
266 280Right-handed alpha
Helix 14
AB5
A
280 289Right-handed alpha
Helix 15
AB6
A
303 312Right-handed alpha
Helix 16
AB7
A
318 346Right-handed alpha
Helix 17
AB8
A
358 368Right-handed alpha
Helix 18
AB9
A
377 382Right-handed alpha
Helix 19
AC1
A
397 401Right-handed 310
Helix 20
AC2
A
412 418Right-handed alpha
Helix 21
AC3
A
419 427Right-handed alpha
Helix 22
AC4
A
442 449Right-handed alpha
Helix 23
AC5
A
454 465Right-handed alpha
Helix 24
AC6
A
494 511Right-handed alpha
Helix 25
AC7
A
516 524Right-handed alpha
Helix 26
AC8
A
524 542Right-handed alpha
Helix 27
AC9
A
566 574Right-handed alpha
Helix 28
AD1
A
580 590Right-handed alpha
Helix 29
AD2
A
627 646Right-handed alpha
Helix 30
AD3
A
670 689Right-handed alpha
Helix 31
AD4
A
720 725Right-handed alpha
Helix 32
AD5
A
738 756Right-handed alpha
Helix 33
AD6
A
759 779Right-handed alpha
Helix 34
AD7
A
780 785Right-handed alpha
Helix 35
AD8
A
786 795Right-handed alpha
Helix 36
AD9
A
809 814Right-handed alpha
Helix 37
AE1
A
820 835Right-handed alpha
Helix 38
AE2
A
838 847Right-handed alpha
Helix 39
AE3
A
880 889Right-handed alpha
Helix 40
AE4
A
894 899Right-handed alpha
Helix 41
AE5
A
902 915Right-handed alpha
Helix 42
AE6
A
921 932Right-handed alpha
Helix 43
AE7
A
932 946Right-handed alpha
Helix 44
AE8
A
949 955Right-handed alpha
Helix 45
AE9
A
960 978Right-handed alpha
Helix 46
AF1
A
986 991Right-handed alpha
Helix 47
AF2
A
994 1006Right-handed alpha
Helix 48
AF3
A
1017 1021Right-handed alpha
Helix 49
AF4
A
1048 1053Right-handed 310
Helix 50
AF5
A
1084 1095Right-handed alpha
Helix 51
AF6
A
1096 1100Right-handed 310
Helix 52
AF7
A
1104 1119Right-handed alpha
Helix 53
AF8
A
1151 1156Right-handed alpha
Helix 54
AF9
A
1178 1197Right-handed alpha
Helix 55
AG1
A
1255 1276Right-handed alpha
Helix 56
AG2
A
1296 1303Right-handed alpha
Helix 57
AG3
A
1307 1319Right-handed alpha
Helix 58
AG4
A
1322 1334Right-handed alpha
Helix 59
AG5
A
1338 1348Right-handed alpha
Helix 60
AG6
A
1359 1367Right-handed alpha
Helix 61
AG7
A
1371 1381Right-handed alpha
Helix 62
AG8
A
1381 1386Right-handed alpha
Helix 63
AG9
A
1387 1393Right-handed alpha
Helix 64
AH1
A
1405 1414Right-handed alpha
Helix 65
AH2
A
1452 1465Right-handed alpha
Helix 66
AH3
A
1476 1485Right-handed alpha
Helix 67
AH4
A
1498 1508Right-handed alpha
Helix 68
AH5
A
1512 1517Right-handed alpha
Helix 69
AH6
A
1519 1526Right-handed 310
Helix 70
AH7
A
1590 1594Right-handed 310
Helix 71
AH8
A
1599 1617Right-handed alpha
Helix 72
AH9
A
1623 1638Right-handed alpha
Helix 73
AI1
A
1683 1689Right-handed alpha
Helix 74
AI2
A
1701 1709Right-handed alpha
Helix 75
AI3
B
128 166Right-handed alpha
Helix 76
AI4
C
128 163Right-handed alpha
Helix 77
AI5
D
128 160Right-handed alpha
Helix 78
AI6
D
161 166Right-handed alpha
Helix 79
AI7
E
127 161Right-handed alpha
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There are 7 sheets in PDB entry 9N0S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 151first strand
Strand 2
A
154 159anti-parallel
Strand 3
A
162 167anti-parallel
Strand 4
A
170 175anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 490first strand
Strand 2
A
473 478anti-parallel
Strand 3
A
591 594parallel
Strand 4
A
615 616anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
650 653first strand
Strand 2
A
659 663anti-parallel
Strand 3
A
546 549anti-parallel
Strand 4
A
698 699anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
704 707first strand
Strand 2
A
710 713anti-parallel
Strand 3
A
716 717anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1022 1026first strand
Strand 2
A
1204 1208anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1470 1471first strand
Strand 2
A
1533 1534parallel
Strand 3
A
1542 1547parallel
Strand 4
A
1563 1567anti-parallel
Strand 5
A
1570 1571anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1651 1652first strand
Strand 2
A
1671 1672anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il