Analysis of interatomic Contacts of Structural Units in PDB entry:
9N0U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9N0U entry

There are 5 chains in PDB entry 9N0U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 18TYR 1230
B
 HIS 127PRO 182
C
 HIS 127THR 166
D
 HIS 127THR 166
E
 HIS 127THR 166
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 9N0U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 40Right-handed alpha
Helix 2
AA2
A
45 54Right-handed alpha
Helix 3
AA3
A
61 63Right-handed 310
Helix 4
AA4
A
64 70Right-handed alpha
Helix 5
AA5
A
81 99Right-handed alpha
Helix 6
AA6
A
104 118Right-handed alpha
Helix 7
AA7
A
118 139Right-handed alpha
Helix 8
AA8
A
176 201Right-handed alpha
Helix 9
AA9
A
208 221Right-handed alpha
Helix 10
AB1
A
225 235Right-handed alpha
Helix 11
AB2
A
235 248Right-handed alpha
Helix 12
AB3
A
261 266Right-handed alpha
Helix 13
AB4
A
266 280Right-handed alpha
Helix 14
AB5
A
280 289Right-handed alpha
Helix 15
AB6
A
300 312Right-handed alpha
Helix 16
AB7
A
318 346Right-handed alpha
Helix 17
AB8
A
358 368Right-handed alpha
Helix 18
AB9
A
371 375Right-handed 310
Helix 19
AC1
A
410 417Right-handed 310
Helix 20
AC2
A
419 428Right-handed alpha
Helix 21
AC3
A
442 449Right-handed alpha
Helix 22
AC4
A
454 465Right-handed alpha
Helix 23
AC5
A
468 471Right-handed 310
Helix 24
AC6
A
494 512Right-handed alpha
Helix 25
AC7
A
516 521Right-handed alpha
Helix 26
AC8
A
524 540Right-handed alpha
Helix 27
AC9
A
553 558Right-handed alpha
Helix 28
AD1
A
559 574Right-handed alpha
Helix 29
AD2
A
581 586Right-handed alpha
Helix 30
AD3
A
627 645Right-handed alpha
Helix 31
AD4
A
670 688Right-handed alpha
Helix 32
AD5
A
694 698Right-handed 310
Helix 33
AD6
A
720 727Right-handed alpha
Helix 34
AD7
A
738 756Right-handed alpha
Helix 35
AD8
A
759 779Right-handed alpha
Helix 36
AD9
A
786 794Right-handed alpha
Helix 37
AE1
A
820 835Right-handed alpha
Helix 38
AE2
A
838 847Right-handed alpha
Helix 39
AE3
A
855 862Right-handed alpha
Helix 40
AE4
A
883 890Right-handed alpha
Helix 41
AE5
A
894 901Right-handed alpha
Helix 42
AE6
A
902 915Right-handed alpha
Helix 43
AE7
A
921 931Right-handed alpha
Helix 44
AE8
A
932 946Right-handed alpha
Helix 45
AE9
A
950 957Right-handed alpha
Helix 46
AF1
A
958 979Right-handed alpha
Helix 47
AF2
A
987 991Right-handed 310
Helix 48
AF3
A
993 1007Right-handed alpha
Helix 49
AF4
A
1017 1021Right-handed alpha
Helix 50
AF5
A
1031 1037Right-handed alpha
Helix 51
AF6
A
1048 1053Right-handed 310
Helix 52
AF7
A
1151 1156Right-handed alpha
Helix 53
AF8
A
1178 1196Right-handed alpha
Helix 54
AF9
B
128 167Right-handed alpha
Helix 55
AG1
C
128 165Right-handed alpha
Helix 56
AG2
D
128 160Right-handed alpha
Helix 57
AG3
D
160 166Right-handed alpha
Helix 58
AG4
E
128 166Right-handed alpha
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There are 6 sheets in PDB entry 9N0U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
170 175parallel
Strand 3
A
162 166anti-parallel
Strand 4
A
154 159anti-parallel
Strand 5
A
145 151anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 353first strand
Strand 2
A
384 386anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 492first strand
Strand 2
A
473 478anti-parallel
Strand 3
A
591 594parallel
Strand 4
A
615 617anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
650 655first strand
Strand 2
A
658 663anti-parallel
Strand 3
A
545 550anti-parallel
Strand 4
A
700 701anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
704 707first strand
Strand 2
A
710 713anti-parallel
Strand 3
A
716 717anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1022 1025first strand
Strand 2
A
1204 1208anti-parallel
Strand 3
A
1038 1043anti-parallel
Strand 4
A
1158 1162anti-parallel
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