Analysis of interatomic Contacts of Structural Units in PDB entry:
9N0Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9N0Z entry

There are 4 chains in PDB entry 9N0Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 9ALA 589
B
 ASP 9ASN 447
C
 ASP 2LEU 309
D
 LEU 1GLU 35
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 9N0Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 20Right-handed alpha
Helix 2
AA2
A
24 43Right-handed alpha
Helix 3
AA3
A
46 56Right-handed alpha
Helix 4
AA4
A
62 74Right-handed alpha
Helix 5
AA5
A
85 89Right-handed 310
Helix 6
AA6
A
90 95Right-handed alpha
Helix 7
AA7
A
102 117Right-handed alpha
Helix 8
AA8
A
120 128Right-handed alpha
Helix 9
AA9
A
128 136Right-handed alpha
Helix 10
AB1
A
142 148Right-handed alpha
Helix 11
AB2
A
159 174Right-handed alpha
Helix 12
AB3
A
178 194Right-handed alpha
Helix 13
AB4
A
197 214Right-handed alpha
Helix 14
AB5
A
222 235Right-handed alpha
Helix 15
AB6
A
244 253Right-handed alpha
Helix 16
AB7
A
256 266Right-handed alpha
Helix 17
AB8
A
266 275Right-handed alpha
Helix 18
AB9
A
275 292Right-handed alpha
Helix 19
AC1
A
296 305Right-handed alpha
Helix 20
AC2
A
305 312Right-handed alpha
Helix 21
AC3
A
317 325Right-handed alpha
Helix 22
AC4
A
326 335Right-handed alpha
Helix 23
AC5
A
338 349Right-handed alpha
Helix 24
AC6
A
350 356Right-handed 310
Helix 25
AC7
A
358 375Right-handed alpha
Helix 26
AC8
A
379 387Right-handed alpha
Helix 27
AC9
A
388 393Right-handed alpha
Helix 28
AD1
A
400 413Right-handed alpha
Helix 29
AD2
A
416 435Right-handed alpha
Helix 30
AD3
A
436 442Right-handed alpha
Helix 31
AD4
A
443 452Right-handed alpha
Helix 32
AD5
A
455 480Right-handed alpha
Helix 33
AD6
A
481 489Right-handed alpha
Helix 34
AD7
A
490 492Right-handed 310
Helix 35
AD8
A
494 513Right-handed alpha
Helix 36
AD9
A
513 529Right-handed alpha
Helix 37
AE1
A
533 548Right-handed alpha
Helix 38
AE2
A
549 551Right-handed 310
Helix 39
AE3
A
552 568Right-handed alpha
Helix 40
AE4
A
572 586Right-handed alpha
Helix 41
AE5
B
26 30Right-handed 310
Helix 42
AE6
B
326 330Right-handed 310
Helix 43
AE7
B
334 338Right-handed 310
Helix 44
AE8
C
3 19Right-handed alpha
Helix 45
AE9
C
24 41Right-handed alpha
Helix 46
AF1
C
61 73Right-handed alpha
Helix 47
AF2
C
92 107Right-handed alpha
Helix 48
AF3
C
120 127Right-handed alpha
Helix 49
AF4
C
128 137Right-handed alpha
Helix 50
AF5
C
140 153Right-handed alpha
Helix 51
AF6
C
177 182Right-handed alpha
Helix 52
AF7
C
193 201Right-handed alpha
Helix 53
AF8
C
221 233Right-handed alpha
Helix 54
AF9
C
264 268Right-handed 310
Helix 55
AG1
D
3 8Right-handed alpha
Helix 56
AG2
D
8 13Right-handed alpha
Helix 57
AG3
D
20 32Right-handed alpha
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There are 14 sheets in PDB entry 9N0Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 13first strand
Strand 2
B
443 444anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 36first strand
Strand 2
B
43 44anti-parallel
Strand 3
B
54 57anti-parallel
Strand 4
B
71 73anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 52first strand
Strand 2
B
77 78anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
109 114first strand
Strand 2
B
119 125anti-parallel
Strand 3
B
165 166anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
109 114first strand
Strand 2
B
119 125anti-parallel
Strand 3
B
170 172anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 132first strand
Strand 2
B
156 159anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
184 185first strand
Strand 2
B
191 195anti-parallel
Strand 3
B
199 204anti-parallel
Strand 4
B
211 216anti-parallel
Strand 5
C
300 301parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
251 252first strand
Strand 2
B
268 269anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
302 303first strand
Strand 2
B
307 310anti-parallel
Strand 3
B
321 324anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
348 350first strand
Strand 2
B
357 360anti-parallel
Strand 3
B
365 368anti-parallel
Strand 4
B
379 380anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
421 424first strand
Strand 2
B
431 434anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
45 48first strand
Strand 2
C
156 159parallel
Strand 3
C
163 165anti-parallel
Strand 4
C
237 239parallel
Strand 5
C
256 258parallel
Strand 6
C
250 251anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
80 81first strand
Strand 2
C
111 112parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
276 278first strand
Strand 2
C
284 286anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il