Analysis of interatomic Contacts of Structural Units in PDB entry:
9N1H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9N1H entry

There are 4 chains in PDB entry 9N1H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 30	LEU 1232
D	SER 30	LEU 1232
B	SER 30	LEU 1232
C	SER 30	LEU 1232

There are184 helices in PDB entry 9N1H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	36	Right-handed alpha
Helix 2	AA2	A	130	141	Right-handed alpha
Helix 3	AA3	A	163	181	Right-handed alpha
Helix 4	AA4	A	192	209	Right-handed alpha
Helix 5	AA5	A	226	231	Right-handed 310
Helix 6	AA6	A	273	287	Right-handed alpha
Helix 7	AA7	A	307	319	Right-handed alpha
Helix 8	AA8	A	334	345	Right-handed alpha
Helix 9	AA9	A	353	368	Right-handed alpha
Helix 10	AB1	A	371	387	Right-handed alpha
Helix 11	AB2	A	404	418	Right-handed alpha
Helix 12	AB3	A	420	432	Right-handed alpha
Helix 13	AB4	A	433	441	Right-handed alpha
Helix 14	AB5	A	451	463	Right-handed alpha
Helix 15	AB6	A	465	476	Right-handed alpha
Helix 16	AB7	A	478	483	Right-handed alpha
Helix 17	AB8	A	484	493	Right-handed alpha
Helix 18	AB9	A	501	514	Right-handed alpha
Helix 19	AC1	A	533	546	Right-handed alpha
Helix 20	AC2	A	555	564	Right-handed alpha
Helix 21	AC3	A	613	625	Right-handed alpha
Helix 22	AC4	A	627	637	Right-handed alpha
Helix 23	AC5	A	640	662	Right-handed alpha
Helix 24	AC6	A	665	694	Right-handed alpha
Helix 25	AC7	A	694	704	Right-handed alpha
Helix 26	AC8	A	713	721	Right-handed alpha
Helix 27	AC9	A	723	728	Right-handed alpha
Helix 28	AD1	A	729	742	Right-handed alpha
Helix 29	AD2	A	751	760	Right-handed alpha
Helix 30	AD3	A	761	767	Right-handed 310
Helix 31	AD4	A	835	846	Right-handed alpha
Helix 32	AD5	A	847	872	Right-handed alpha
Helix 33	AD6	A	879	902	Right-handed alpha
Helix 34	AD7	A	907	917	Right-handed alpha
Helix 35	AD8	A	918	939	Right-handed alpha
Helix 36	AD9	A	943	968	Right-handed alpha
Helix 37	AE1	A	972	1010	Right-handed alpha
Helix 38	AE2	A	1017	1030	Right-handed alpha
Helix 39	AE3	A	1031	1033	Right-handed 310
Helix 40	AE4	A	1036	1040	Right-handed 310
Helix 41	AE5	A	1066	1094	Right-handed alpha
Helix 42	AE6	A	1094	1120	Right-handed alpha
Helix 43	AE7	A	1124	1126	Right-handed 310
Helix 44	AE8	A	1127	1145	Right-handed alpha
Helix 45	AE9	A	1163	1191	Right-handed alpha
Helix 46	AF1	A	1192	1232	Right-handed alpha
Helix 47	AF2	D	31	36	Right-handed alpha
Helix 48	AF3	D	130	141	Right-handed alpha
Helix 49	AF4	D	163	181	Right-handed alpha
Helix 50	AF5	D	192	209	Right-handed alpha
Helix 51	AF6	D	226	231	Right-handed 310
Helix 52	AF7	D	273	287	Right-handed alpha
Helix 53	AF8	D	307	319	Right-handed alpha
Helix 54	AF9	D	334	345	Right-handed alpha
Helix 55	AG1	D	353	368	Right-handed alpha
Helix 56	AG2	D	371	387	Right-handed alpha
Helix 57	AG3	D	404	418	Right-handed alpha
Helix 58	AG4	D	420	432	Right-handed alpha
Helix 59	AG5	D	433	441	Right-handed alpha
Helix 60	AG6	D	451	463	Right-handed alpha
Helix 61	AG7	D	465	476	Right-handed alpha
Helix 62	AG8	D	478	483	Right-handed alpha
Helix 63	AG9	D	484	493	Right-handed alpha
Helix 64	AH1	D	501	514	Right-handed alpha
Helix 65	AH2	D	533	546	Right-handed alpha
Helix 66	AH3	D	555	564	Right-handed alpha
Helix 67	AH4	D	613	625	Right-handed alpha
Helix 68	AH5	D	627	637	Right-handed alpha
Helix 69	AH6	D	640	662	Right-handed alpha
Helix 70	AH7	D	665	694	Right-handed alpha
Helix 71	AH8	D	694	704	Right-handed alpha
Helix 72	AH9	D	713	721	Right-handed alpha
Helix 73	AI1	D	723	728	Right-handed alpha
Helix 74	AI2	D	729	742	Right-handed alpha
Helix 75	AI3	D	751	760	Right-handed alpha
Helix 76	AI4	D	761	767	Right-handed 310
Helix 77	AI5	D	835	846	Right-handed alpha
Helix 78	AI6	D	847	872	Right-handed alpha
Helix 79	AI7	D	879	902	Right-handed alpha
Helix 80	AI8	D	907	917	Right-handed alpha
Helix 81	AI9	D	918	939	Right-handed alpha
Helix 82	AJ1	D	943	968	Right-handed alpha
Helix 83	AJ2	D	972	1010	Right-handed alpha
Helix 84	AJ3	D	1017	1030	Right-handed alpha
Helix 85	AJ4	D	1031	1033	Right-handed 310
Helix 86	AJ5	D	1036	1040	Right-handed 310
Helix 87	AJ6	D	1066	1094	Right-handed alpha
Helix 88	AJ7	D	1094	1120	Right-handed alpha
Helix 89	AJ8	D	1124	1126	Right-handed 310
Helix 90	AJ9	D	1127	1145	Right-handed alpha
Helix 91	AK1	D	1163	1191	Right-handed alpha
Helix 92	AK2	D	1192	1232	Right-handed alpha
Helix 93	AK3	B	31	36	Right-handed alpha
Helix 94	AK4	B	130	141	Right-handed alpha
Helix 95	AK5	B	163	181	Right-handed alpha
Helix 96	AK6	B	192	209	Right-handed alpha
Helix 97	AK7	B	226	231	Right-handed 310
Helix 98	AK8	B	273	287	Right-handed alpha
Helix 99	AK9	B	307	319	Right-handed alpha
Helix 100	AL1	B	334	345	Right-handed alpha
Helix 101	AL2	B	353	368	Right-handed alpha
Helix 102	AL3	B	371	387	Right-handed alpha
Helix 103	AL4	B	404	418	Right-handed alpha
Helix 104	AL5	B	420	432	Right-handed alpha
Helix 105	AL6	B	433	441	Right-handed alpha
Helix 106	AL7	B	451	463	Right-handed alpha
Helix 107	AL8	B	465	476	Right-handed alpha
Helix 108	AL9	B	478	483	Right-handed alpha
Helix 109	AM1	B	484	493	Right-handed alpha
Helix 110	AM2	B	501	514	Right-handed alpha
Helix 111	AM3	B	533	546	Right-handed alpha
Helix 112	AM4	B	555	564	Right-handed alpha
Helix 113	AM5	B	613	625	Right-handed alpha
Helix 114	AM6	B	627	637	Right-handed alpha
Helix 115	AM7	B	640	662	Right-handed alpha
Helix 116	AM8	B	665	694	Right-handed alpha
Helix 117	AM9	B	694	704	Right-handed alpha
Helix 118	AN1	B	713	721	Right-handed alpha
Helix 119	AN2	B	723	728	Right-handed alpha
Helix 120	AN3	B	729	742	Right-handed alpha
Helix 121	AN4	B	751	760	Right-handed alpha
Helix 122	AN5	B	761	767	Right-handed 310
Helix 123	AN6	B	835	846	Right-handed alpha
Helix 124	AN7	B	847	872	Right-handed alpha
Helix 125	AN8	B	879	902	Right-handed alpha
Helix 126	AN9	B	907	917	Right-handed alpha
Helix 127	AO1	B	918	939	Right-handed alpha
Helix 128	AO2	B	943	968	Right-handed alpha
Helix 129	AO3	B	972	1010	Right-handed alpha
Helix 130	AO4	B	1017	1030	Right-handed alpha
Helix 131	AO5	B	1031	1033	Right-handed 310
Helix 132	AO6	B	1036	1040	Right-handed 310
Helix 133	AO7	B	1066	1094	Right-handed alpha
Helix 134	AO8	B	1094	1120	Right-handed alpha
Helix 135	AO9	B	1124	1126	Right-handed 310
Helix 136	AP1	B	1127	1145	Right-handed alpha
Helix 137	AP2	B	1163	1191	Right-handed alpha
Helix 138	AP3	B	1192	1232	Right-handed alpha
Helix 139	AP4	C	31	36	Right-handed alpha
Helix 140	AP5	C	130	141	Right-handed alpha
Helix 141	AP6	C	163	181	Right-handed alpha
Helix 142	AP7	C	192	209	Right-handed alpha
Helix 143	AP8	C	226	231	Right-handed 310
Helix 144	AP9	C	273	287	Right-handed alpha
Helix 145	AQ1	C	307	319	Right-handed alpha
Helix 146	AQ2	C	334	345	Right-handed alpha
Helix 147	AQ3	C	353	368	Right-handed alpha
Helix 148	AQ4	C	371	387	Right-handed alpha
Helix 149	AQ5	C	404	418	Right-handed alpha
Helix 150	AQ6	C	420	432	Right-handed alpha
Helix 151	AQ7	C	433	441	Right-handed alpha
Helix 152	AQ8	C	451	463	Right-handed alpha
Helix 153	AQ9	C	465	476	Right-handed alpha
Helix 154	AR1	C	478	483	Right-handed alpha
Helix 155	AR2	C	484	493	Right-handed alpha
Helix 156	AR3	C	501	514	Right-handed alpha
Helix 157	AR4	C	533	546	Right-handed alpha
Helix 158	AR5	C	555	564	Right-handed alpha
Helix 159	AR6	C	613	625	Right-handed alpha
Helix 160	AR7	C	627	637	Right-handed alpha
Helix 161	AR8	C	640	662	Right-handed alpha
Helix 162	AR9	C	665	694	Right-handed alpha
Helix 163	AS1	C	694	704	Right-handed alpha
Helix 164	AS2	C	713	721	Right-handed alpha
Helix 165	AS3	C	723	728	Right-handed alpha
Helix 166	AS4	C	729	742	Right-handed alpha
Helix 167	AS5	C	751	760	Right-handed alpha
Helix 168	AS6	C	761	767	Right-handed 310
Helix 169	AS7	C	835	846	Right-handed alpha
Helix 170	AS8	C	847	872	Right-handed alpha
Helix 171	AS9	C	879	902	Right-handed alpha
Helix 172	AT1	C	907	917	Right-handed alpha
Helix 173	AT2	C	918	939	Right-handed alpha
Helix 174	AT3	C	943	968	Right-handed alpha
Helix 175	AT4	C	972	1010	Right-handed alpha
Helix 176	AT5	C	1017	1030	Right-handed alpha
Helix 177	AT6	C	1031	1033	Right-handed 310
Helix 178	AT7	C	1036	1040	Right-handed 310
Helix 179	AT8	C	1066	1094	Right-handed alpha
Helix 180	AT9	C	1094	1120	Right-handed alpha
Helix 181	AU1	C	1124	1126	Right-handed 310
Helix 182	AU2	C	1127	1145	Right-handed alpha
Helix 183	AU3	C	1163	1191	Right-handed alpha
Helix 184	AU4	C	1192	1232	Right-handed alpha

There are 16 sheets in PDB entry 9N1H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	40	first strand
Strand 2	A	99	102	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	240	first strand
Strand 2	A	105	112	parallel
Strand 3	A	119	123	anti-parallel
Strand 4	A	258	259	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	126	first strand
Strand 2	A	262	263	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	184	186	first strand
Strand 2	A	150	155	parallel
Strand 3	A	299	304	parallel
Strand 4	A	326	329	parallel
Strand 5	A	392	395	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	37	40	first strand
Strand 2	D	99	102	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	232	240	first strand
Strand 2	D	105	112	parallel
Strand 3	D	119	123	anti-parallel
Strand 4	D	258	259	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	125	126	first strand
Strand 2	D	262	263	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	184	186	first strand
Strand 2	D	150	155	parallel
Strand 3	D	299	304	parallel
Strand 4	D	326	329	parallel
Strand 5	D	392	395	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	37	40	first strand
Strand 2	B	99	102	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	232	240	first strand
Strand 2	B	105	112	parallel
Strand 3	B	119	123	anti-parallel
Strand 4	B	258	259	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	125	126	first strand
Strand 2	B	262	263	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	184	186	first strand
Strand 2	B	150	155	parallel
Strand 3	B	299	304	parallel
Strand 4	B	326	329	parallel
Strand 5	B	392	395	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	37	40	first strand
Strand 2	C	99	102	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	232	240	first strand
Strand 2	C	105	112	parallel
Strand 3	C	119	123	anti-parallel
Strand 4	C	258	259	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	126	first strand
Strand 2	C	262	263	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	184	186	first strand
Strand 2	C	150	155	parallel
Strand 3	C	299	304	parallel
Strand 4	C	326	329	parallel
Strand 5	C	392	395	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9N1H

Analysis of interatomic Contacts of Structural Units in PDB entry:
9N1H