Analysis of interatomic Contacts of Structural Units in PDB entry:
9N2F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9N2F entry

There are 2 chains in PDB entry 9N2F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
F
 GLN 21LYS 264
A
 ILE 195PHE 901
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 9N2F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
F
21 26Right-handed alpha
Helix 2
AA2
F
28 43Right-handed alpha
Helix 3
AA3
F
44 55Right-handed alpha
Helix 4
AA4
F
70 80Right-handed alpha
Helix 5
AA5
F
81 95Right-handed alpha
Helix 6
AA6
F
101 115Right-handed alpha
Helix 7
AA7
F
124 140Right-handed alpha
Helix 8
AA8
F
146 175Right-handed alpha
Helix 9
AA9
F
177 186Right-handed alpha
Helix 10
AB1
F
197 215Right-handed alpha
Helix 11
AB2
F
217 220Right-handed 310
Helix 12
AB3
F
221 239Right-handed alpha
Helix 13
AB4
F
244 263Right-handed alpha
Helix 14
AB5
A
207 215Right-handed alpha
Helix 15
AB6
A
224 230Right-handed 310
Helix 16
AB7
A
233 252Right-handed alpha
Helix 17
AB8
A
298 307Right-handed alpha
Helix 18
AB9
A
315 324Right-handed alpha
Helix 19
AC1
A
333 339Right-handed alpha
Helix 20
AC2
A
386 392Right-handed alpha
Helix 21
AC3
A
403 418Right-handed alpha
Helix 22
AC4
A
636 641Right-handed alpha
Helix 23
AC5
A
647 655Right-handed 310
Helix 24
AC6
A
702 711Right-handed alpha
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There are 7 sheets in PDB entry 9N2F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 201first strand
Strand 2
A
272 279parallel
Strand 3
A
257 265anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 292first strand
Strand 2
A
359 367parallel
Strand 3
A
347 356anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 374first strand
Strand 2
A
438 444parallel
Strand 3
A
378 380parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 374first strand
Strand 2
A
438 444parallel
Strand 3
A
426 433anti-parallel
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There are 16 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
451 454first strand
Strand 2
A
469 475anti-parallel
Strand 3
A
495 503anti-parallel
Strand 4
A
507 516anti-parallel
Strand 5
A
525 539anti-parallel
Strand 6
A
546 563anti-parallel
Strand 7
A
572 586anti-parallel
Strand 8
A
599 612anti-parallel
Strand 9
A
626 633anti-parallel
Strand 10
A
717 724anti-parallel
Strand 11
A
734 745anti-parallel
Strand 12
A
807 821anti-parallel
Strand 13
A
826 839anti-parallel
Strand 14
A
851 860anti-parallel
Strand 15
A
868 875anti-parallel
Strand 16
A
727 728first strand
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 458first strand
Strand 2
A
895 896anti-parallel
Strand 3
A
868 875anti-parallel
Strand 4
A
851 860anti-parallel
Strand 5
A
826 839anti-parallel
Strand 6
A
807 821anti-parallel
Strand 7
A
734 745anti-parallel
Strand 8
A
891 892first strand
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
677 680first strand
Strand 2
A
689 693anti-parallel
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