Analysis of interatomic Contacts of Structural Units in PDB entry:
9N2Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9N2Q entry

There are 6 chains in PDB entry 9N2Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 10ASN 406
B
 SER 10ASN 406
C
 SER 10ASN 406
D
 SER 10ASN 406
E
 SER 10ASN 406
F
 SER 10ASN 406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are113 helices in PDB entry 9N2Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 28Right-handed alpha
Helix 2
AA2
A
34 47Right-handed alpha
Helix 3
AA3
A
49 66Right-handed alpha
Helix 4
AA4
A
80 90Right-handed alpha
Helix 5
AA5
A
135 144Right-handed alpha
Helix 6
AA6
A
145 148Right-handed 310
Helix 7
AA7
A
160 173Right-handed alpha
Helix 8
AA8
A
183 195Right-handed alpha
Helix 9
AA9
A
200 219Right-handed alpha
Helix 10
AB1
A
238 249Right-handed alpha
Helix 11
AB2
A
251 262Right-handed alpha
Helix 12
AB3
A
266 291Right-handed alpha
Helix 13
AB4
A
292 295Right-handed 310
Helix 14
AB5
A
297 313Right-handed alpha
Helix 15
AB6
A
316 327Right-handed alpha
Helix 16
AB7
A
332 338Right-handed alpha
Helix 17
AB8
A
339 344Right-handed 310
Helix 18
AB9
A
352 369Right-handed alpha
Helix 19
AC1
A
375 405Right-handed alpha
Helix 20
AC2
B
11 28Right-handed alpha
Helix 21
AC3
B
34 47Right-handed alpha
Helix 22
AC4
B
49 66Right-handed alpha
Helix 23
AC5
B
80 90Right-handed alpha
Helix 24
AC6
B
135 144Right-handed alpha
Helix 25
AC7
B
145 148Right-handed 310
Helix 26
AC8
B
160 173Right-handed alpha
Helix 27
AC9
B
183 195Right-handed alpha
Helix 28
AD1
B
200 219Right-handed alpha
Helix 29
AD2
B
238 249Right-handed alpha
Helix 30
AD3
B
251 262Right-handed alpha
Helix 31
AD4
B
266 291Right-handed alpha
Helix 32
AD5
B
292 295Right-handed 310
Helix 33
AD6
B
297 313Right-handed alpha
Helix 34
AD7
B
316 327Right-handed alpha
Helix 35
AD8
B
332 338Right-handed alpha
Helix 36
AD9
B
339 344Right-handed 310
Helix 37
AE1
B
352 369Right-handed alpha
Helix 38
AE2
B
375 406Right-handed alpha
Helix 39
AE3
C
11 28Right-handed alpha
Helix 40
AE4
C
34 47Right-handed alpha
Helix 41
AE5
C
49 66Right-handed alpha
Helix 42
AE6
C
80 90Right-handed alpha
Helix 43
AE7
C
135 144Right-handed alpha
Helix 44
AE8
C
145 148Right-handed 310
Helix 45
AE9
C
160 173Right-handed alpha
Helix 46
AF1
C
183 195Right-handed alpha
Helix 47
AF2
C
200 219Right-handed alpha
Helix 48
AF3
C
238 249Right-handed alpha
Helix 49
AF4
C
251 262Right-handed alpha
Helix 50
AF5
C
266 291Right-handed alpha
Helix 51
AF6
C
292 295Right-handed 310
Helix 52
AF7
C
297 313Right-handed alpha
Helix 53
AF8
C
316 327Right-handed alpha
Helix 54
AF9
C
332 338Right-handed alpha
Helix 55
AG1
C
339 344Right-handed 310
Helix 56
AG2
C
352 369Right-handed alpha
Helix 57
AG3
C
375 406Right-handed alpha
Helix 58
AG4
D
11 28Right-handed alpha
Helix 59
AG5
D
34 47Right-handed alpha
Helix 60
AG6
D
49 66Right-handed alpha
Helix 61
AG7
D
80 89Right-handed alpha
Helix 62
AG8
D
135 144Right-handed alpha
Helix 63
AG9
D
145 148Right-handed 310
Helix 64
AH1
D
160 173Right-handed alpha
Helix 65
AH2
D
183 195Right-handed alpha
Helix 66
AH3
D
200 219Right-handed alpha
Helix 67
AH4
D
238 249Right-handed alpha
Helix 68
AH5
D
251 262Right-handed alpha
Helix 69
AH6
D
266 291Right-handed alpha
Helix 70
AH7
D
292 295Right-handed 310
Helix 71
AH8
D
297 313Right-handed alpha
Helix 72
AH9
D
316 327Right-handed alpha
Helix 73
AI1
D
332 338Right-handed alpha
Helix 74
AI2
D
339 344Right-handed 310
Helix 75
AI3
D
352 369Right-handed alpha
Helix 76
AI4
D
375 406Right-handed alpha
Helix 77
AI5
E
12 28Right-handed alpha
Helix 78
AI6
E
34 47Right-handed alpha
Helix 79
AI7
E
49 66Right-handed alpha
Helix 80
AI8
E
80 90Right-handed alpha
Helix 81
AI9
E
137 144Right-handed alpha
Helix 82
AJ1
E
145 148Right-handed 310
Helix 83
AJ2
E
160 173Right-handed alpha
Helix 84
AJ3
E
183 195Right-handed alpha
Helix 85
AJ4
E
200 219Right-handed alpha
Helix 86
AJ5
E
238 250Right-handed alpha
Helix 87
AJ6
E
251 262Right-handed alpha
Helix 88
AJ7
E
266 291Right-handed alpha
Helix 89
AJ8
E
297 313Right-handed alpha
Helix 90
AJ9
E
316 327Right-handed alpha
Helix 91
AK1
E
332 338Right-handed alpha
Helix 92
AK2
E
339 344Right-handed 310
Helix 93
AK3
E
352 369Right-handed alpha
Helix 94
AK4
E
375 406Right-handed alpha
Helix 95
AK5
F
11 28Right-handed alpha
Helix 96
AK6
F
34 47Right-handed alpha
Helix 97
AK7
F
49 66Right-handed alpha
Helix 98
AK8
F
80 90Right-handed alpha
Helix 99
AK9
F
135 144Right-handed alpha
Helix 100
AL1
F
145 148Right-handed 310
Helix 101
AL2
F
160 173Right-handed alpha
Helix 102
AL3
F
183 195Right-handed alpha
Helix 103
AL4
F
200 219Right-handed alpha
Helix 104
AL5
F
238 249Right-handed alpha
Helix 105
AL6
F
251 262Right-handed alpha
Helix 106
AL7
F
266 291Right-handed alpha
Helix 107
AL8
F
292 295Right-handed 310
Helix 108
AL9
F
297 313Right-handed alpha
Helix 109
AM1
F
316 327Right-handed alpha
Helix 110
AM2
F
332 338Right-handed alpha
Helix 111
AM3
F
339 344Right-handed 310
Helix 112
AM4
F
352 369Right-handed alpha
Helix 113
AM5
F
375 406Right-handed alpha
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There are 6 sheets in PDB entry 9N2Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 115first strand
Strand 2
A
118 126anti-parallel
Strand 3
A
69 75parallel
Strand 4
A
150 155parallel
Strand 5
A
176 181parallel
Strand 6
A
226 228parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 115first strand
Strand 2
B
118 126anti-parallel
Strand 3
B
69 75parallel
Strand 4
B
150 155parallel
Strand 5
B
176 181parallel
Strand 6
B
226 228parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
111 115first strand
Strand 2
C
118 126anti-parallel
Strand 3
C
69 74parallel
Strand 4
C
150 155parallel
Strand 5
C
176 181parallel
Strand 6
C
226 228parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
111 115first strand
Strand 2
D
118 126anti-parallel
Strand 3
D
69 74parallel
Strand 4
D
150 155parallel
Strand 5
D
176 181parallel
Strand 6
D
226 228parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
111 115first strand
Strand 2
E
118 126anti-parallel
Strand 3
E
69 75parallel
Strand 4
E
150 155parallel
Strand 5
E
176 181parallel
Strand 6
E
226 228parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
111 115first strand
Strand 2
F
118 126anti-parallel
Strand 3
F
69 75parallel
Strand 4
F
150 155parallel
Strand 5
F
176 181parallel
Strand 6
F
226 228parallel
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