Analysis of interatomic Contacts of Structural Units in PDB entry:
9N2R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9N2R entry

There are 6 chains in PDB entry 9N2R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLU 11ASN 406
A
 GLU 11ASN 406
C
 SER 10ASN 406
D
 GLN 13ASN 406
E
 ASP 12ASN 406
F
 GLN 13ASN 406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are116 helices in PDB entry 9N2R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
11 28Right-handed alpha
Helix 2
AA2
B
34 48Right-handed alpha
Helix 3
AA3
B
49 66Right-handed alpha
Helix 4
AA4
B
80 90Right-handed alpha
Helix 5
AA5
B
135 143Right-handed alpha
Helix 6
AA6
B
144 148Right-handed 310
Helix 7
AA7
B
160 173Right-handed alpha
Helix 8
AA8
B
183 195Right-handed alpha
Helix 9
AA9
B
200 219Right-handed alpha
Helix 10
AB1
B
238 249Right-handed alpha
Helix 11
AB2
B
251 262Right-handed alpha
Helix 12
AB3
B
266 289Right-handed alpha
Helix 13
AB4
B
297 313Right-handed alpha
Helix 14
AB5
B
316 327Right-handed alpha
Helix 15
AB6
B
332 337Right-handed alpha
Helix 16
AB7
B
338 339Right-handed 310
Helix 17
AB8
B
340 344Right-handed 310
Helix 18
AB9
B
352 369Right-handed alpha
Helix 19
AC1
B
375 405Right-handed alpha
Helix 20
AC2
A
12 28Right-handed alpha
Helix 21
AC3
A
34 48Right-handed alpha
Helix 22
AC4
A
49 66Right-handed alpha
Helix 23
AC5
A
80 90Right-handed alpha
Helix 24
AC6
A
135 143Right-handed alpha
Helix 25
AC7
A
144 148Right-handed 310
Helix 26
AC8
A
160 173Right-handed alpha
Helix 27
AC9
A
183 195Right-handed alpha
Helix 28
AD1
A
200 220Right-handed alpha
Helix 29
AD2
A
238 249Right-handed alpha
Helix 30
AD3
A
253 262Right-handed alpha
Helix 31
AD4
A
266 289Right-handed alpha
Helix 32
AD5
A
297 313Right-handed alpha
Helix 33
AD6
A
316 327Right-handed alpha
Helix 34
AD7
A
332 337Right-handed alpha
Helix 35
AD8
A
338 339Right-handed 310
Helix 36
AD9
A
340 344Right-handed 310
Helix 37
AE1
A
352 369Right-handed alpha
Helix 38
AE2
A
375 405Right-handed alpha
Helix 39
AE3
C
11 28Right-handed alpha
Helix 40
AE4
C
34 48Right-handed alpha
Helix 41
AE5
C
49 66Right-handed alpha
Helix 42
AE6
C
80 89Right-handed alpha
Helix 43
AE7
C
135 143Right-handed alpha
Helix 44
AE8
C
144 148Right-handed 310
Helix 45
AE9
C
160 173Right-handed alpha
Helix 46
AF1
C
183 195Right-handed alpha
Helix 47
AF2
C
200 219Right-handed alpha
Helix 48
AF3
C
238 249Right-handed alpha
Helix 49
AF4
C
251 262Right-handed alpha
Helix 50
AF5
C
266 289Right-handed alpha
Helix 51
AF6
C
297 313Right-handed alpha
Helix 52
AF7
C
316 327Right-handed alpha
Helix 53
AF8
C
332 337Right-handed alpha
Helix 54
AF9
C
338 339Right-handed 310
Helix 55
AG1
C
340 344Right-handed 310
Helix 56
AG2
C
352 369Right-handed alpha
Helix 57
AG3
C
375 405Right-handed alpha
Helix 58
AG4
D
14 28Right-handed alpha
Helix 59
AG5
D
34 48Right-handed alpha
Helix 60
AG6
D
49 66Right-handed alpha
Helix 61
AG7
D
80 90Right-handed alpha
Helix 62
AG8
D
135 143Right-handed alpha
Helix 63
AG9
D
144 148Right-handed 310
Helix 64
AH1
D
160 173Right-handed alpha
Helix 65
AH2
D
183 195Right-handed alpha
Helix 66
AH3
D
200 219Right-handed alpha
Helix 67
AH4
D
238 249Right-handed alpha
Helix 68
AH5
D
251 262Right-handed alpha
Helix 69
AH6
D
266 289Right-handed alpha
Helix 70
AH7
D
297 313Right-handed alpha
Helix 71
AH8
D
316 327Right-handed alpha
Helix 72
AH9
D
332 337Right-handed alpha
Helix 73
AI1
D
338 339Right-handed 310
Helix 74
AI2
D
340 344Right-handed 310
Helix 75
AI3
D
352 369Right-handed alpha
Helix 76
AI4
D
375 405Right-handed alpha
Helix 77
AI5
E
13 28Right-handed alpha
Helix 78
AI6
E
34 48Right-handed alpha
Helix 79
AI7
E
49 66Right-handed alpha
Helix 80
AI8
E
80 89Right-handed alpha
Helix 81
AI9
E
135 143Right-handed alpha
Helix 82
AJ1
E
144 148Right-handed 310
Helix 83
AJ2
E
160 173Right-handed alpha
Helix 84
AJ3
E
183 195Right-handed alpha
Helix 85
AJ4
E
200 219Right-handed alpha
Helix 86
AJ5
E
238 249Right-handed alpha
Helix 87
AJ6
E
251 262Right-handed alpha
Helix 88
AJ7
E
266 289Right-handed alpha
Helix 89
AJ8
E
290 292Right-handed 310
Helix 90
AJ9
E
297 313Right-handed alpha
Helix 91
AK1
E
316 327Right-handed alpha
Helix 92
AK2
E
332 337Right-handed alpha
Helix 93
AK3
E
338 339Right-handed 310
Helix 94
AK4
E
340 344Right-handed 310
Helix 95
AK5
E
352 369Right-handed alpha
Helix 96
AK6
E
375 405Right-handed alpha
Helix 97
AK7
F
14 28Right-handed alpha
Helix 98
AK8
F
34 48Right-handed alpha
Helix 99
AK9
F
49 66Right-handed alpha
Helix 100
AL1
F
80 90Right-handed alpha
Helix 101
AL2
F
135 143Right-handed alpha
Helix 102
AL3
F
144 148Right-handed 310
Helix 103
AL4
F
160 173Right-handed alpha
Helix 104
AL5
F
183 195Right-handed alpha
Helix 105
AL6
F
200 219Right-handed alpha
Helix 106
AL7
F
238 249Right-handed alpha
Helix 107
AL8
F
251 262Right-handed alpha
Helix 108
AL9
F
266 289Right-handed alpha
Helix 109
AM1
F
290 292Right-handed 310
Helix 110
AM2
F
297 313Right-handed alpha
Helix 111
AM3
F
316 327Right-handed alpha
Helix 112
AM4
F
332 337Right-handed alpha
Helix 113
AM5
F
338 339Right-handed 310
Helix 114
AM6
F
340 344Right-handed 310
Helix 115
AM7
F
352 369Right-handed alpha
Helix 116
AM8
F
375 405Right-handed alpha
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There are 6 sheets in PDB entry 9N2R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 114first strand
Strand 2
B
121 126anti-parallel
Strand 3
B
69 75parallel
Strand 4
B
150 155parallel
Strand 5
B
176 181parallel
Strand 6
B
226 228parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 114first strand
Strand 2
A
121 126anti-parallel
Strand 3
A
69 75parallel
Strand 4
A
150 155parallel
Strand 5
A
176 181parallel
Strand 6
A
226 228parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
111 114first strand
Strand 2
C
121 126anti-parallel
Strand 3
C
69 75parallel
Strand 4
C
150 155parallel
Strand 5
C
176 181parallel
Strand 6
C
226 228parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
111 114first strand
Strand 2
D
121 126anti-parallel
Strand 3
D
69 75parallel
Strand 4
D
150 155parallel
Strand 5
D
176 181parallel
Strand 6
D
226 228parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
111 114first strand
Strand 2
E
121 126anti-parallel
Strand 3
E
69 75parallel
Strand 4
E
150 155parallel
Strand 5
E
176 181parallel
Strand 6
E
226 228parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
111 114first strand
Strand 2
F
121 126anti-parallel
Strand 3
F
69 74parallel
Strand 4
F
150 155parallel
Strand 5
F
176 181parallel
Strand 6
F
226 228parallel
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