Analysis of interatomic Contacts of Structural Units in PDB entry:
9N2T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9N2T entry

There are 3 chains in PDB entry 9N2T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLN 13ASN 406
A
 ASP 12ASN 406
C
 ASP 14ASN 406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 9N2T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
13 27Right-handed alpha
Helix 2
AA2
B
34 47Right-handed alpha
Helix 3
AA3
B
49 66Right-handed alpha
Helix 4
AA4
B
80 88Right-handed alpha
Helix 5
AA5
B
138 143Right-handed alpha
Helix 6
AA6
B
144 148Right-handed 310
Helix 7
AA7
B
160 173Right-handed alpha
Helix 8
AA8
B
183 195Right-handed alpha
Helix 9
AA9
B
200 218Right-handed alpha
Helix 10
AB1
B
238 249Right-handed alpha
Helix 11
AB2
B
251 262Right-handed alpha
Helix 12
AB3
B
266 291Right-handed alpha
Helix 13
AB4
B
292 295Right-handed 310
Helix 14
AB5
B
297 313Right-handed alpha
Helix 15
AB6
B
316 327Right-handed alpha
Helix 16
AB7
B
332 337Right-handed alpha
Helix 17
AB8
B
338 339Right-handed 310
Helix 18
AB9
B
340 344Right-handed 310
Helix 19
AC1
B
352 369Right-handed alpha
Helix 20
AC2
B
375 406Right-handed alpha
Helix 21
AC3
A
13 28Right-handed alpha
Helix 22
AC4
A
34 47Right-handed alpha
Helix 23
AC5
A
49 66Right-handed alpha
Helix 24
AC6
A
80 90Right-handed alpha
Helix 25
AC7
A
138 143Right-handed alpha
Helix 26
AC8
A
144 148Right-handed 310
Helix 27
AC9
A
160 173Right-handed alpha
Helix 28
AD1
A
183 195Right-handed alpha
Helix 29
AD2
A
200 220Right-handed alpha
Helix 30
AD3
A
238 249Right-handed alpha
Helix 31
AD4
A
251 262Right-handed alpha
Helix 32
AD5
A
266 290Right-handed alpha
Helix 33
AD6
A
291 295Right-handed 310
Helix 34
AD7
A
297 313Right-handed alpha
Helix 35
AD8
A
316 327Right-handed alpha
Helix 36
AD9
A
332 337Right-handed alpha
Helix 37
AE1
A
338 339Right-handed 310
Helix 38
AE2
A
340 344Right-handed 310
Helix 39
AE3
A
352 369Right-handed alpha
Helix 40
AE4
A
375 405Right-handed alpha
Helix 41
AE5
C
15 28Right-handed alpha
Helix 42
AE6
C
34 47Right-handed alpha
Helix 43
AE7
C
49 66Right-handed alpha
Helix 44
AE8
C
80 88Right-handed alpha
Helix 45
AE9
C
135 143Right-handed alpha
Helix 46
AF1
C
144 148Right-handed 310
Helix 47
AF2
C
160 173Right-handed alpha
Helix 48
AF3
C
183 195Right-handed alpha
Helix 49
AF4
C
200 218Right-handed alpha
Helix 50
AF5
C
238 249Right-handed alpha
Helix 51
AF6
C
251 262Right-handed alpha
Helix 52
AF7
C
266 291Right-handed alpha
Helix 53
AF8
C
292 295Right-handed 310
Helix 54
AF9
C
297 313Right-handed alpha
Helix 55
AG1
C
316 327Right-handed alpha
Helix 56
AG2
C
332 339Right-handed alpha
Helix 57
AG3
C
340 344Right-handed 310
Helix 58
AG4
C
352 369Right-handed alpha
Helix 59
AG5
C
375 405Right-handed alpha
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There are 3 sheets in PDB entry 9N2T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 114first strand
Strand 2
B
121 126anti-parallel
Strand 3
B
69 74parallel
Strand 4
B
150 155parallel
Strand 5
B
176 181parallel
Strand 6
B
226 228parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 114first strand
Strand 2
A
121 126anti-parallel
Strand 3
A
69 74parallel
Strand 4
A
150 155parallel
Strand 5
A
176 181parallel
Strand 6
A
226 228parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
111 114first strand
Strand 2
C
121 126anti-parallel
Strand 3
C
69 74parallel
Strand 4
C
150 155parallel
Strand 5
C
176 181parallel
Strand 6
C
226 228parallel
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