Analysis of interatomic Contacts of Structural Units in PDB entry:
9N2X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9N2X entry

There are 2 chains in PDB entry 9N2X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1LYS 143
B
 LYS 1LYS 143
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 9N2X

There are 3 sheets in PDB entry 9N2X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 109first strand
Strand 2
A
97 105anti-parallel
Strand 3
A
134 142anti-parallel
Strand 4
A
2 9parallel
Strand 5
A
47 54anti-parallel
Strand 6
A
36 42anti-parallel
Strand 7
B
36 42anti-parallel
Strand 8
B
47 54anti-parallel
Strand 9
B
2 9anti-parallel
Strand 10
B
134 142parallel
Strand 11
B
97 105anti-parallel
Strand 12
B
108 110anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 29first strand
Strand 2
A
14 24anti-parallel
Strand 3
B
14 24anti-parallel
Strand 4
B
27 29anti-parallel
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There are 12 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 119first strand
Strand 2
A
122 129anti-parallel
Strand 3
A
86 93anti-parallel
Strand 4
A
72 83anti-parallel
Strand 5
A
59 69anti-parallel
Strand 6
A
14 24anti-parallel
Strand 7
B
14 24anti-parallel
Strand 8
B
59 69anti-parallel
Strand 9
B
72 83anti-parallel
Strand 10
B
86 93anti-parallel
Strand 11
B
122 129anti-parallel
Strand 12
B
115 119anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il