Analysis of interatomic Contacts of Structural Units in PDB entry:
9N4T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9N4T entry

There are 6 chains in PDB entry 9N4T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 33ARG 874
B
THR 33GLU 864
C
THR 33ARG 874
D
THR 33GLU 864
E
THR 43THR 382
F
THR 43THR 382
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are132 helices in PDB entry 9N4T. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
51 65Right-handed alpha
Helix 2
AA2
A
87 102Right-handed alpha
Helix 3
AA3
A
111 126Right-handed alpha
Helix 4
AA4
A
155 167Right-handed alpha
Helix 5
AA5
A
178 183Right-handed 310
Helix 6
AA6
A
185 190Right-handed alpha
Helix 7
AA7
A
191 194Right-handed 310
Helix 8
AA8
A
211 221Right-handed alpha
Helix 9
AA9
A
231 242Right-handed alpha
Helix 10
AB1
A
260 264Right-handed 310
Helix 11
AB2
A
286 297Right-handed alpha
Helix 12
AB3
A
317 336Right-handed alpha
Helix 13
AB4
A
355 365Right-handed alpha
Helix 14
AB5
A
461 472Right-handed alpha
Helix 15
AB6
A
499 507Right-handed alpha
Helix 16
AB7
A
520 525Right-handed alpha
Helix 17
AB8
A
562 585Right-handed alpha
Helix 18
AB9
A
607 616Right-handed alpha
Helix 19
AC1
A
632 655Right-handed alpha
Helix 20
AC2
A
671 677Right-handed alpha
Helix 21
AC3
A
688 697Right-handed alpha
Helix 22
AC4
A
703 712Right-handed alpha
Helix 23
AC5
A
712 716Right-handed alpha
Helix 24
AC6
A
721 731Right-handed alpha
Helix 25
AC7
A
741 749Right-handed alpha
Helix 26
AC8
A
776 788Right-handed alpha
Helix 27
AC9
A
789 794Right-handed alpha
Helix 28
AD1
A
794 799Right-handed alpha
Helix 29
AD2
A
822 853Right-handed alpha
Helix 30
AD3
A
858 867Right-handed alpha
Helix 31
AD4
B
51 67Right-handed alpha
Helix 32
AD5
B
87 102Right-handed alpha
Helix 33
AD6
B
111 126Right-handed alpha
Helix 34
AD7
B
152 167Right-handed alpha
Helix 35
AD8
B
180 185Right-handed alpha
Helix 36
AD9
B
185 190Right-handed alpha
Helix 37
AE1
B
211 221Right-handed alpha
Helix 38
AE2
B
231 244Right-handed alpha
Helix 39
AE3
B
260 264Right-handed 310
Helix 40
AE4
B
266 270Right-handed 310
Helix 41
AE5
B
286 299Right-handed alpha
Helix 42
AE6
B
317 336Right-handed alpha
Helix 43
AE7
B
355 364Right-handed alpha
Helix 44
AE8
B
461 474Right-handed alpha
Helix 45
AE9
B
499 507Right-handed alpha
Helix 46
AF1
B
520 525Right-handed alpha
Helix 47
AF2
B
562 567Right-handed alpha
Helix 48
AF3
B
567 575Right-handed alpha
Helix 49
AF4
B
577 585Right-handed alpha
Helix 50
AF5
B
607 618Right-handed alpha
Helix 51
AF6
B
631 659Right-handed alpha
Helix 52
AF7
B
670 675Right-handed alpha
Helix 53
AF8
B
690 696Right-handed alpha
Helix 54
AF9
B
699 712Right-handed alpha
Helix 55
AG1
B
712 717Right-handed alpha
Helix 56
AG2
B
720 729Right-handed alpha
Helix 57
AG3
B
739 749Right-handed alpha
Helix 58
AG4
B
773 789Right-handed alpha
Helix 59
AG5
B
789 799Right-handed alpha
Helix 60
AG6
B
822 849Right-handed alpha
Helix 61
AG7
B
850 852Right-handed 310
Helix 62
AG8
B
858 863Right-handed alpha
Helix 63
AG9
C
51 65Right-handed alpha
Helix 64
AH1
C
87 102Right-handed alpha
Helix 65
AH2
C
111 126Right-handed alpha
Helix 66
AH3
C
155 167Right-handed alpha
Helix 67
AH4
C
178 183Right-handed 310
Helix 68
AH5
C
185 190Right-handed alpha
Helix 69
AH6
C
191 194Right-handed 310
Helix 70
AH7
C
211 221Right-handed alpha
Helix 71
AH8
C
231 242Right-handed alpha
Helix 72
AH9
C
260 264Right-handed 310
Helix 73
AI1
C
286 297Right-handed alpha
Helix 74
AI2
C
317 336Right-handed alpha
Helix 75
AI3
C
355 365Right-handed alpha
Helix 76
AI4
C
461 472Right-handed alpha
Helix 77
AI5
C
499 507Right-handed alpha
Helix 78
AI6
C
520 525Right-handed alpha
Helix 79
AI7
C
562 585Right-handed alpha
Helix 80
AI8
C
607 616Right-handed alpha
Helix 81
AI9
C
632 655Right-handed alpha
Helix 82
AJ1
C
671 677Right-handed alpha
Helix 83
AJ2
C
688 697Right-handed alpha
Helix 84
AJ3
C
703 712Right-handed alpha
Helix 85
AJ4
C
712 716Right-handed alpha
Helix 86
AJ5
C
721 731Right-handed alpha
Helix 87
AJ6
C
741 749Right-handed alpha
Helix 88
AJ7
C
776 788Right-handed alpha
Helix 89
AJ8
C
789 794Right-handed alpha
Helix 90
AJ9
C
794 799Right-handed alpha
Helix 91
AK1
C
822 853Right-handed alpha
Helix 92
AK2
C
858 867Right-handed alpha
Helix 93
AK3
D
51 67Right-handed alpha
Helix 94
AK4
D
87 102Right-handed alpha
Helix 95
AK5
D
111 126Right-handed alpha
Helix 96
AK6
D
152 167Right-handed alpha
Helix 97
AK7
D
180 185Right-handed alpha
Helix 98
AK8
D
185 190Right-handed alpha
Helix 99
AK9
D
211 221Right-handed alpha
Helix 100
AL1
D
231 244Right-handed alpha
Helix 101
AL2
D
260 264Right-handed 310
Helix 102
AL3
D
266 270Right-handed 310
Helix 103
AL4
D
286 299Right-handed alpha
Helix 104
AL5
D
317 336Right-handed alpha
Helix 105
AL6
D
355 364Right-handed alpha
Helix 106
AL7
D
461 474Right-handed alpha
Helix 107
AL8
D
499 507Right-handed alpha
Helix 108
AL9
D
520 525Right-handed alpha
Helix 109
AM1
D
562 567Right-handed alpha
Helix 110
AM2
D
567 575Right-handed alpha
Helix 111
AM3
D
577 585Right-handed alpha
Helix 112
AM4
D
607 618Right-handed alpha
Helix 113
AM5
D
631 659Right-handed alpha
Helix 114
AM6
D
670 675Right-handed alpha
Helix 115
AM7
D
690 696Right-handed alpha
Helix 116
AM8
D
699 712Right-handed alpha
Helix 117
AM9
D
712 717Right-handed alpha
Helix 118
AN1
D
720 729Right-handed alpha
Helix 119
AN2
D
739 749Right-handed alpha
Helix 120
AN3
D
773 789Right-handed alpha
Helix 121
AN4
D
789 799Right-handed alpha
Helix 122
AN5
D
822 849Right-handed alpha
Helix 123
AN6
D
850 852Right-handed 310
Helix 124
AN7
D
858 863Right-handed alpha
Helix 125
AN8
E
191 196Right-handed alpha
Helix 126
AN9
E
278 283Right-handed 310
Helix 127
AO1
E
338 342Right-handed 310
Helix 128
AO2
E
347 372Right-handed alpha
Helix 129
AO3
F
191 196Right-handed alpha
Helix 130
AO4
F
278 283Right-handed 310
Helix 131
AO5
F
338 342Right-handed 310
Helix 132
AO6
F
347 372Right-handed alpha
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There are 52 sheets in PDB entry 9N4T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
38 43first strand
Strand 2
A
78 83parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
129 131first strand
Strand 2
A
146 151parallel
Strand 3
A
383 384parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
175 176first strand
Strand 2
A
202 203parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
225 228first strand
Strand 2
A
253 256parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
368 370first strand
Strand 2
A
373 375anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
392 394first strand
Strand 2
A
399 401anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
433 437first strand
Strand 2
A
478 482parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
445 446first strand
Strand 2
A
459 460anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
527 528first strand
Strand 2
A
768 769anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
735 738first strand
Strand 2
A
538 543anti-parallel
Strand 3
A
752 754anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
684 685first strand
Strand 2
A
717 718parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
37 43first strand
Strand 2
B
77 83parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
129 131first strand
Strand 2
B
146 151parallel
Strand 3
B
383 384parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
202 203first strand
Strand 2
B
173 176parallel
Strand 3
B
225 229parallel
Strand 4
B
253 256parallel
Strand 5
B
275 277parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
368 370first strand
Strand 2
B
373 375anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
392 395first strand
Strand 2
B
398 401anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
405 406first strand
Strand 2
B
410 411anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
434 436first strand
Strand 2
B
479 481parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
445 446first strand
Strand 2
B
459 460anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
528 529first strand
Strand 2
B
767 768anti-parallel
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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
535 536first strand
Strand 2
B
762 763anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
681 683first strand
Strand 2
B
733 738parallel
Strand 3
B
538 543anti-parallel
Strand 4
B
752 755anti-parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
38 43first strand
Strand 2
C
78 83parallel
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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
129 131first strand
Strand 2
C
146 151parallel
Strand 3
C
383 384parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
175 176first strand
Strand 2
C
202 203parallel
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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
225 228first strand
Strand 2
C
253 256parallel
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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
368 370first strand
Strand 2
C
373 375anti-parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
392 394first strand
Strand 2
C
399 401anti-parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
433 437first strand
Strand 2
C
478 482parallel
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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
445 446first strand
Strand 2
C
459 460anti-parallel
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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
527 528first strand
Strand 2
C
768 769anti-parallel
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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
735 738first strand
Strand 2
C
538 543anti-parallel
Strand 3
C
752 754anti-parallel
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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
684 685first strand
Strand 2
C
717 718parallel
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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
37 43first strand
Strand 2
D
77 83parallel
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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
129 131first strand
Strand 2
D
146 151parallel
Strand 3
D
383 384parallel
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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
202 203first strand
Strand 2
D
173 176parallel
Strand 3
D
225 229parallel
Strand 4
D
253 256parallel
Strand 5
D
275 277parallel
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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
368 370first strand
Strand 2
D
373 375anti-parallel
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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
392 395first strand
Strand 2
D
398 401anti-parallel
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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
405 406first strand
Strand 2
D
410 411anti-parallel
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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
434 436first strand
Strand 2
D
479 481parallel
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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
445 446first strand
Strand 2
D
459 460anti-parallel
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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
528 529first strand
Strand 2
D
767 768anti-parallel
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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
535 536first strand
Strand 2
D
762 763anti-parallel
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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
681 683first strand
Strand 2
D
733 738parallel
Strand 3
D
538 543anti-parallel
Strand 4
D
752 755anti-parallel
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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
87 88first strand
Strand 2
E
154 155anti-parallel
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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
207 212first strand
Strand 2
E
269 274anti-parallel
Strand 3
E
239 242anti-parallel
Strand 4
E
251 255anti-parallel
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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
223 227first strand
Strand 2
E
284 287anti-parallel
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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
301 304first strand
Strand 2
E
308 311anti-parallel
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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
87 88first strand
Strand 2
F
154 155anti-parallel
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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
207 212first strand
Strand 2
F
269 274anti-parallel
Strand 3
F
239 242anti-parallel
Strand 4
F
251 255anti-parallel
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There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
223 227first strand
Strand 2
F
284 287anti-parallel
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There are 2 strands in AF7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
301 304first strand
Strand 2
F
308 311anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il