Analysis of interatomic Contacts of Structural Units in PDB entry:
9N63


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9N63 entry

There are 2 chains in PDB entry 9N63 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 173PRO 743
B
 MET 138GLN 681
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 9N63. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
173 179Right-handed alpha
Helix 2
AA2
A
183 202Right-handed alpha
Helix 3
AA3
A
203 208Right-handed alpha
Helix 4
AA4
A
227 269Right-handed alpha
Helix 5
AA5
A
274 279Right-handed alpha
Helix 6
AA6
A
280 290Right-handed alpha
Helix 7
AA7
A
290 320Right-handed alpha
Helix 8
AA8
A
325 335Right-handed alpha
Helix 9
AA9
A
336 338Right-handed 310
Helix 10
AB1
A
339 372Right-handed alpha
Helix 11
AB2
A
373 380Right-handed alpha
Helix 12
AB3
A
382 436Right-handed alpha
Helix 13
AB4
A
440 475Right-handed alpha
Helix 14
AB5
A
475 484Right-handed alpha
Helix 15
AB6
A
543 552Right-handed alpha
Helix 16
AB7
A
570 572Right-handed 310
Helix 17
AB8
A
573 580Right-handed alpha
Helix 18
AB9
A
595 600Right-handed alpha
Helix 19
AC1
A
608 619Right-handed alpha
Helix 20
AC2
A
621 626Right-handed alpha
Helix 21
AC3
A
630 634Right-handed 310
Helix 22
AC4
A
644 658Right-handed alpha
Helix 23
AC5
A
674 687Right-handed alpha
Helix 24
AC6
A
690 693Right-handed 310
Helix 25
AC7
A
725 732Right-handed alpha
Helix 26
AC8
A
733 741Right-handed alpha
Helix 27
AC9
B
139 145Right-handed alpha
Helix 28
AD1
B
148 178Right-handed alpha
Helix 29
AD2
B
179 181Right-handed 310
Helix 30
AD3
B
188 234Right-handed alpha
Helix 31
AD4
B
239 244Right-handed alpha
Helix 32
AD5
B
245 260Right-handed alpha
Helix 33
AD6
B
263 282Right-handed alpha
Helix 34
AD7
B
289 300Right-handed alpha
Helix 35
AD8
B
303 338Right-handed alpha
Helix 36
AD9
B
338 345Right-handed alpha
Helix 37
AE1
B
347 384Right-handed alpha
Helix 38
AE2
B
384 398Right-handed alpha
Helix 39
AE3
B
405 410Right-handed alpha
Helix 40
AE4
B
412 439Right-handed alpha
Helix 41
AE5
B
440 448Right-handed alpha
Helix 42
AE6
B
508 517Right-handed alpha
Helix 43
AE7
B
535 537Right-handed 310
Helix 44
AE8
B
538 543Right-handed alpha
Helix 45
AE9
B
559 565Right-handed alpha
Helix 46
AF1
B
572 583Right-handed alpha
Helix 47
AF2
B
585 590Right-handed alpha
Helix 48
AF3
B
594 598Right-handed 310
Helix 49
AF4
B
601 605Right-handed 310
Helix 50
AF5
B
608 622Right-handed alpha
Helix 51
AF6
B
638 645Right-handed alpha
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There are 5 sheets in PDB entry 9N63. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
527 528first strand
Strand 2
A
503 506anti-parallel
Strand 3
A
561 564anti-parallel
Strand 4
A
567 568anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
508 510first strand
Strand 2
A
521 524anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
581 583first strand
Strand 2
A
663 667parallel
Strand 3
A
695 699parallel
Strand 4
A
532 537parallel
Strand 5
A
711 716parallel
Strand 6
A
719 724anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
486 493first strand
Strand 2
B
468 475anti-parallel
Strand 3
B
524 529anti-parallel
Strand 4
B
532 533anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
546 549first strand
Strand 2
B
627 631parallel
Strand 3
B
655 659parallel
Strand 4
B
498 502parallel
Strand 5
B
671 676parallel
Strand 6
B
679 680anti-parallel
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