Analysis of interatomic Contacts of Structural Units in PDB entry:
9N64


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9N64 entry

There are 2 chains in PDB entry 9N64 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 173PRO 743
B
 MET 138GLN 681
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 9N64. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
176 182Right-handed 310
Helix 2
AA2
A
183 203Right-handed alpha
Helix 3
AA3
A
229 270Right-handed alpha
Helix 4
AA4
A
274 279Right-handed alpha
Helix 5
AA5
A
280 320Right-handed alpha
Helix 6
AA6
A
325 335Right-handed alpha
Helix 7
AA7
A
336 338Right-handed 310
Helix 8
AA8
A
339 373Right-handed alpha
Helix 9
AA9
A
373 380Right-handed alpha
Helix 10
AB1
A
382 435Right-handed alpha
Helix 11
AB2
A
440 475Right-handed alpha
Helix 12
AB3
A
475 484Right-handed alpha
Helix 13
AB4
A
543 552Right-handed alpha
Helix 14
AB5
A
570 572Right-handed 310
Helix 15
AB6
A
573 580Right-handed alpha
Helix 16
AB7
A
594 600Right-handed alpha
Helix 17
AB8
A
608 619Right-handed alpha
Helix 18
AB9
A
621 626Right-handed alpha
Helix 19
AC1
A
630 634Right-handed 310
Helix 20
AC2
A
637 641Right-handed 310
Helix 21
AC3
A
644 658Right-handed alpha
Helix 22
AC4
A
677 687Right-handed alpha
Helix 23
AC5
A
688 694Right-handed 310
Helix 24
AC6
A
725 732Right-handed alpha
Helix 25
AC7
A
734 741Right-handed alpha
Helix 26
AC8
B
139 144Right-handed alpha
Helix 27
AC9
B
148 167Right-handed alpha
Helix 28
AD1
B
168 178Right-handed alpha
Helix 29
AD2
B
179 181Right-handed 310
Helix 30
AD3
B
187 234Right-handed alpha
Helix 31
AD4
B
237 244Right-handed alpha
Helix 32
AD5
B
245 255Right-handed alpha
Helix 33
AD6
B
255 261Right-handed alpha
Helix 34
AD7
B
268 285Right-handed alpha
Helix 35
AD8
B
286 292Right-handed 310
Helix 36
AD9
B
306 337Right-handed alpha
Helix 37
AE1
B
338 343Right-handed alpha
Helix 38
AE2
B
347 384Right-handed alpha
Helix 39
AE3
B
384 397Right-handed alpha
Helix 40
AE4
B
405 410Right-handed alpha
Helix 41
AE5
B
412 439Right-handed alpha
Helix 42
AE6
B
440 449Right-handed alpha
Helix 43
AE7
B
508 516Right-handed alpha
Helix 44
AE8
B
535 537Right-handed 310
Helix 45
AE9
B
538 545Right-handed alpha
Helix 46
AF1
B
560 565Right-handed alpha
Helix 47
AF2
B
572 583Right-handed alpha
Helix 48
AF3
B
585 590Right-handed alpha
Helix 49
AF4
B
594 598Right-handed 310
Helix 50
AF5
B
601 605Right-handed 310
Helix 51
AF6
B
608 622Right-handed alpha
Helix 52
AF7
B
638 645Right-handed alpha
Helix 53
AF8
B
647 651Right-handed 310
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There are 4 sheets in PDB entry 9N64. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
521 528first strand
Strand 2
A
503 510anti-parallel
Strand 3
A
561 564anti-parallel
Strand 4
A
567 568anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
581 583first strand
Strand 2
A
663 667parallel
Strand 3
A
695 699parallel
Strand 4
A
533 537parallel
Strand 5
A
711 716parallel
Strand 6
A
719 724anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
492 493first strand
Strand 2
B
468 474anti-parallel
Strand 3
B
524 529anti-parallel
Strand 4
B
532 533anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
546 549first strand
Strand 2
B
627 631parallel
Strand 3
B
655 659parallel
Strand 4
B
498 502parallel
Strand 5
B
671 676parallel
Strand 6
B
679 680anti-parallel
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