Analysis of interatomic Contacts of Structural Units in PDB entry:
9N65


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9N65 entry

There are 2 chains in PDB entry 9N65 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 173ALA 742
B
 GLN 131GLN 681
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 9N65. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
173 180Right-handed alpha
Helix 2
AA2
A
183 202Right-handed alpha
Helix 3
AA3
A
203 217Right-handed alpha
Helix 4
AA4
A
223 269Right-handed alpha
Helix 5
AA5
A
280 289Right-handed alpha
Helix 6
AA6
A
289 324Right-handed alpha
Helix 7
AA7
A
326 334Right-handed alpha
Helix 8
AA8
A
334 339Right-handed alpha
Helix 9
AA9
A
340 372Right-handed alpha
Helix 10
AB1
A
373 381Right-handed alpha
Helix 11
AB2
A
382 436Right-handed alpha
Helix 12
AB3
A
440 483Right-handed alpha
Helix 13
AB4
A
544 552Right-handed alpha
Helix 14
AB5
A
568 572Right-handed 310
Helix 15
AB6
A
573 580Right-handed alpha
Helix 16
AB7
A
594 600Right-handed alpha
Helix 17
AB8
A
608 620Right-handed alpha
Helix 18
AB9
A
621 626Right-handed alpha
Helix 19
AC1
A
644 659Right-handed alpha
Helix 20
AC2
A
674 681Right-handed alpha
Helix 21
AC3
A
681 687Right-handed alpha
Helix 22
AC4
A
688 694Right-handed 310
Helix 23
AC5
A
725 733Right-handed alpha
Helix 24
AC6
A
734 742Right-handed alpha
Helix 25
AC7
B
132 144Right-handed alpha
Helix 26
AC8
B
148 167Right-handed alpha
Helix 27
AC9
B
168 181Right-handed alpha
Helix 28
AD1
B
185 234Right-handed alpha
Helix 29
AD2
B
237 244Right-handed alpha
Helix 30
AD3
B
245 255Right-handed alpha
Helix 31
AD4
B
255 262Right-handed alpha
Helix 32
AD5
B
262 289Right-handed alpha
Helix 33
AD6
B
289 298Right-handed alpha
Helix 34
AD7
B
299 338Right-handed alpha
Helix 35
AD8
B
338 344Right-handed alpha
Helix 36
AD9
B
347 402Right-handed alpha
Helix 37
AE1
B
405 428Right-handed alpha
Helix 38
AE2
B
429 437Right-handed alpha
Helix 39
AE3
B
440 449Right-handed alpha
Helix 40
AE4
B
510 517Right-handed alpha
Helix 41
AE5
B
540 545Right-handed alpha
Helix 42
AE6
B
559 565Right-handed alpha
Helix 43
AE7
B
575 580Right-handed alpha
Helix 44
AE8
B
613 621Right-handed alpha
Helix 45
AE9
B
634 640Right-handed 310
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There are 4 sheets in PDB entry 9N65. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
521 528first strand
Strand 2
A
503 510anti-parallel
Strand 3
A
561 564anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
581 583first strand
Strand 2
A
663 667parallel
Strand 3
A
695 699parallel
Strand 4
A
533 537parallel
Strand 5
A
711 714parallel
Strand 6
A
723 724anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
491 493first strand
Strand 2
B
468 471anti-parallel
Strand 3
B
526 528anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
546 549first strand
Strand 2
B
627 630parallel
Strand 3
B
655 660parallel
Strand 4
B
498 502parallel
Strand 5
B
671 676parallel
Strand 6
B
679 680anti-parallel
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