Analysis of interatomic Contacts of Structural Units in PDB entry:
9N66


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9N66 entry

There are 2 chains in PDB entry 9N66 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 173PRO 743
B
 MET 138GLN 681
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 9N66. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
173 179Right-handed 310
Helix 2
AA2
A
180 182Right-handed 310
Helix 3
AA3
A
183 203Right-handed alpha
Helix 4
AA4
A
229 271Right-handed alpha
Helix 5
AA5
A
274 279Right-handed alpha
Helix 6
AA6
A
280 319Right-handed alpha
Helix 7
AA7
A
329 334Right-handed alpha
Helix 8
AA8
A
335 338Right-handed 310
Helix 9
AA9
A
339 345Right-handed alpha
Helix 10
AB1
A
345 373Right-handed alpha
Helix 11
AB2
A
373 380Right-handed alpha
Helix 12
AB3
A
382 402Right-handed alpha
Helix 13
AB4
A
402 436Right-handed alpha
Helix 14
AB5
A
439 442Right-handed 310
Helix 15
AB6
A
443 463Right-handed alpha
Helix 16
AB7
A
464 475Right-handed alpha
Helix 17
AB8
A
475 483Right-handed alpha
Helix 18
AB9
A
543 552Right-handed alpha
Helix 19
AC1
A
570 572Right-handed 310
Helix 20
AC2
A
573 580Right-handed alpha
Helix 21
AC3
A
595 600Right-handed alpha
Helix 22
AC4
A
608 619Right-handed alpha
Helix 23
AC5
A
621 626Right-handed alpha
Helix 24
AC6
A
630 634Right-handed 310
Helix 25
AC7
A
637 641Right-handed 310
Helix 26
AC8
A
646 658Right-handed alpha
Helix 27
AC9
A
674 687Right-handed alpha
Helix 28
AD1
A
688 694Right-handed 310
Helix 29
AD2
A
702 707Right-handed alpha
Helix 30
AD3
A
725 733Right-handed alpha
Helix 31
AD4
A
734 741Right-handed alpha
Helix 32
AD5
B
139 145Right-handed alpha
Helix 33
AD6
B
148 178Right-handed alpha
Helix 34
AD7
B
187 234Right-handed alpha
Helix 35
AD8
B
239 244Right-handed alpha
Helix 36
AD9
B
245 262Right-handed alpha
Helix 37
AE1
B
264 282Right-handed alpha
Helix 38
AE2
B
293 299Right-handed alpha
Helix 39
AE3
B
303 338Right-handed alpha
Helix 40
AE4
B
338 345Right-handed alpha
Helix 41
AE5
B
347 394Right-handed alpha
Helix 42
AE6
B
405 412Right-handed alpha
Helix 43
AE7
B
412 423Right-handed alpha
Helix 44
AE8
B
423 438Right-handed alpha
Helix 45
AE9
B
440 448Right-handed alpha
Helix 46
AF1
B
508 517Right-handed alpha
Helix 47
AF2
B
535 537Right-handed 310
Helix 48
AF3
B
538 545Right-handed alpha
Helix 49
AF4
B
560 565Right-handed alpha
Helix 50
AF5
B
572 583Right-handed alpha
Helix 51
AF6
B
585 590Right-handed alpha
Helix 52
AF7
B
594 597Right-handed 310
Helix 53
AF8
B
601 605Right-handed 310
Helix 54
AF9
B
608 622Right-handed alpha
Helix 55
AG1
B
638 645Right-handed alpha
Helix 56
AG2
B
662 666Right-handed 310
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There are 5 sheets in PDB entry 9N66. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
527 528first strand
Strand 2
A
503 505anti-parallel
Strand 3
A
562 564anti-parallel
Strand 4
A
567 568anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
581 583first strand
Strand 2
A
663 667parallel
Strand 3
A
695 699parallel
Strand 4
A
533 537parallel
Strand 5
A
711 716parallel
Strand 6
A
719 724anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
486 493first strand
Strand 2
B
468 475anti-parallel
Strand 3
B
524 529anti-parallel
Strand 4
B
532 533anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
546 549first strand
Strand 2
B
627 631parallel
Strand 3
B
655 660parallel
Strand 4
B
498 502parallel
Strand 5
B
671 676parallel
Strand 6
B
679 680anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
558 559first strand
Strand 2
B
599 600anti-parallel
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