Analysis of interatomic Contacts of Structural Units in PDB entry:
9N6A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9N6A entry

There is 1 chain in PDB entry 9N6A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 248GLY 614
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 9N6A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
255 257Right-handed 310
Helix 2
AA2
A
263 265Right-handed 310
Helix 3
AA3
A
420 424Right-handed 310
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There are 7 sheets in PDB entry 9N6A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 253first strand
Strand 2
A
443 450anti-parallel
Strand 3
A
314 320anti-parallel
Strand 4
A
384 391anti-parallel
Strand 5
A
394 402anti-parallel
Strand 6
A
405 411anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 261first strand
Strand 2
A
278 281anti-parallel
Strand 3
A
285 288anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 273first strand
Strand 2
A
295 301anti-parallel
Strand 3
A
425 431anti-parallel
Strand 4
A
329 336anti-parallel
Strand 5
A
343 351anti-parallel
Strand 6
A
357 366anti-parallel
Strand 7
A
369 378anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
487 491first strand
Strand 2
A
460 464anti-parallel
Strand 3
A
607 614anti-parallel
Strand 4
A
510 517anti-parallel
Strand 5
A
573 577anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
471 473first strand
Strand 2
A
595 598anti-parallel
Strand 3
A
519 520anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
478 479first strand
Strand 2
A
582 589anti-parallel
Strand 3
A
531 538anti-parallel
Strand 4
A
541 545anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
495 498first strand
Strand 2
A
503 506anti-parallel
Strand 3
A
582 589anti-parallel
Strand 4
A
531 538anti-parallel
Strand 5
A
549 550anti-parallel
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