Analysis of interatomic Contacts of Structural Units in PDB entry:
9N7Q

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9N7Q entry

There are 12 chains in PDB entry 9N7Q (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
H	GLU 1	SER 114
L	ILE 2	LYS 108
A	ASP 11	ARG 337
a	GLY 4	ILE 173
E	GLU 1	SER 114
G	ILE 2	LYS 108
B	ASP 11	ARG 337
b	GLY 4	ILE 173
D	GLU 1	SER 114
F	ILE 2	LYS 108
C	ASP 11	ARG 337
c	GLY 4	ILE 173

There are 24 helices in PDB entry 9N7Q. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	L	79	83	Right-handed 310
Helix 2	AA2	A	66	72	Right-handed alpha
Helix 3	AA3	A	107	115	Right-handed alpha
Helix 4	AA4	A	194	202	Right-handed alpha
Helix 5	AA5	a	37	58	Right-handed alpha
Helix 6	AA6	a	74	127	Right-handed alpha
Helix 7	AA7	a	145	155	Right-handed alpha
Helix 8	AA8	a	158	173	Right-handed alpha
Helix 9	AA9	G	79	83	Right-handed 310
Helix 10	AB1	B	66	72	Right-handed alpha
Helix 11	AB2	B	107	115	Right-handed alpha
Helix 12	AB3	B	194	202	Right-handed alpha
Helix 13	AB4	b	37	58	Right-handed alpha
Helix 14	AB5	b	74	127	Right-handed alpha
Helix 15	AB6	b	145	155	Right-handed alpha
Helix 16	AB7	b	158	173	Right-handed alpha
Helix 17	AB8	F	79	83	Right-handed 310
Helix 18	AB9	C	66	72	Right-handed alpha
Helix 19	AC1	C	107	115	Right-handed alpha
Helix 20	AC2	C	194	202	Right-handed alpha
Helix 21	AC3	c	37	58	Right-handed alpha
Helix 22	AC4	c	74	127	Right-handed alpha
Helix 23	AC5	c	145	155	Right-handed alpha
Helix 24	AC6	c	158	173	Right-handed alpha

There are 42 sheets in PDB entry 9N7Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	19	25	anti-parallel
Strand 3	H	77	81	anti-parallel
Strand 4	H	68	72	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	57	59	first strand
Strand 2	H	45	51	anti-parallel
Strand 3	H	32	39	anti-parallel
Strand 4	H	92	98	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	5	first strand
Strand 2	L	19	29	anti-parallel
Strand 3	L	68	75	anti-parallel
Strand 4	L	63	66	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	12	first strand
Strand 2	L	103	106	parallel
Strand 3	L	85	89	anti-parallel
Strand 4	L	34	38	anti-parallel
Strand 5	L	44	49	anti-parallel
Strand 6	L	53	54	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	33	34	first strand
Strand 2	a	22	26	anti-parallel
Strand 3	A	12	17	anti-parallel
Strand 4	a	137	140	anti-parallel
Strand 5	a	130	132	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	24	26	first strand
Strand 2	A	34	36	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	41	first strand
Strand 2	A	323	325	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	44	first strand
Strand 2	A	302	303	parallel
Strand 3	A	315	316	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	54	first strand
Strand 2	A	282	287	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	63	first strand
Strand 2	A	89	91	parallel
Strand 3	A	275	277	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	158	160	first strand
Strand 2	A	259	261	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	171	176	first strand
Strand 2	A	249	254	anti-parallel
Strand 3	A	209	213	anti-parallel
Strand 4	A	217	220	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	238	244	first strand
Strand 2	A	182	189	anti-parallel
Strand 3	A	265	267	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	289	290	first strand
Strand 2	A	310	311	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	7	first strand
Strand 2	E	19	25	anti-parallel
Strand 3	E	77	81	anti-parallel
Strand 4	E	68	72	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	57	59	first strand
Strand 2	E	45	51	anti-parallel
Strand 3	E	32	39	anti-parallel
Strand 4	E	92	98	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	4	5	first strand
Strand 2	G	19	29	anti-parallel
Strand 3	G	68	75	anti-parallel
Strand 4	G	63	66	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	12	first strand
Strand 2	G	103	106	parallel
Strand 3	G	85	89	anti-parallel
Strand 4	G	34	38	anti-parallel
Strand 5	G	44	49	anti-parallel
Strand 6	G	53	54	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	33	34	first strand
Strand 2	b	22	26	anti-parallel
Strand 3	B	12	17	anti-parallel
Strand 4	b	137	140	anti-parallel
Strand 5	b	130	132	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	24	26	first strand
Strand 2	B	34	36	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	41	first strand
Strand 2	B	323	325	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	43	44	first strand
Strand 2	B	302	303	parallel
Strand 3	B	315	316	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	54	first strand
Strand 2	B	282	287	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	63	first strand
Strand 2	B	89	91	parallel
Strand 3	B	275	277	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	158	160	first strand
Strand 2	B	259	261	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	176	first strand
Strand 2	B	249	254	anti-parallel
Strand 3	B	209	213	anti-parallel
Strand 4	B	217	220	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	238	244	first strand
Strand 2	B	182	189	anti-parallel
Strand 3	B	265	267	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	289	290	first strand
Strand 2	B	310	311	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	7	first strand
Strand 2	D	19	25	anti-parallel
Strand 3	D	77	81	anti-parallel
Strand 4	D	68	72	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	59	first strand
Strand 2	D	45	51	anti-parallel
Strand 3	D	32	39	anti-parallel
Strand 4	D	92	98	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	5	first strand
Strand 2	F	19	29	anti-parallel
Strand 3	F	68	75	anti-parallel
Strand 4	F	63	66	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	12	first strand
Strand 2	F	103	106	parallel
Strand 3	F	85	89	anti-parallel
Strand 4	F	34	38	anti-parallel
Strand 5	F	44	49	anti-parallel
Strand 6	F	53	54	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	33	34	first strand
Strand 2	c	22	26	anti-parallel
Strand 3	C	12	17	anti-parallel
Strand 4	c	137	140	anti-parallel
Strand 5	c	130	132	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	24	26	first strand
Strand 2	C	34	36	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	39	41	first strand
Strand 2	C	323	325	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	44	first strand
Strand 2	C	302	303	parallel
Strand 3	C	315	316	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	51	54	first strand
Strand 2	C	282	287	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	60	63	first strand
Strand 2	C	89	91	parallel
Strand 3	C	275	277	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	158	160	first strand
Strand 2	C	259	261	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	171	176	first strand
Strand 2	C	249	254	anti-parallel
Strand 3	C	209	213	anti-parallel
Strand 4	C	217	220	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	238	244	first strand
Strand 2	C	182	189	anti-parallel
Strand 3	C	265	267	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	289	290	first strand
Strand 2	C	310	311	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9N7Q

Analysis of interatomic Contacts of Structural Units in PDB entry:
9N7Q