Analysis of interatomic Contacts of Structural Units in PDB entry:
9N8P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9N8P entry

There are 12 chains in PDB entry 9N8P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 5	ARG 327
B	GLY 501	PRO 660
C	ASP 5	ARG 327
D	GLY 501	PRO 660
E	ASP 5	ARG 327
F	GLY 501	PRO 660
G	ASP 5	ARG 327
H	GLY 501	PRO 660
I	ASP 5	ARG 327
J	GLY 501	PRO 660
K	ASP 5	ARG 327
L	GLY 501	PRO 660

There are 44 helices in PDB entry 9N8P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	60	67	Right-handed alpha
Helix 2	AA2	A	68	75	Right-handed 310
Helix 3	AA3	A	101	110	Right-handed alpha
Helix 4	AA4	A	187	196	Right-handed alpha
Helix 5	AA5	B	537	559	Right-handed alpha
Helix 6	AA6	B	574	627	Right-handed alpha
Helix 7	AA7	B	645	655	Right-handed alpha
Helix 8	AA8	C	60	67	Right-handed alpha
Helix 9	AA9	C	68	75	Right-handed 310
Helix 10	AB1	C	101	110	Right-handed alpha
Helix 11	AB2	C	122	127	Right-handed alpha
Helix 12	AB3	C	187	196	Right-handed alpha
Helix 13	AB4	D	537	559	Right-handed alpha
Helix 14	AB5	D	574	624	Right-handed alpha
Helix 15	AB6	D	645	654	Right-handed alpha
Helix 16	AB7	E	60	67	Right-handed alpha
Helix 17	AB8	E	68	75	Right-handed 310
Helix 18	AB9	E	101	110	Right-handed alpha
Helix 19	AC1	E	187	195	Right-handed alpha
Helix 20	AC2	F	537	558	Right-handed alpha
Helix 21	AC3	F	574	627	Right-handed alpha
Helix 22	AC4	F	645	655	Right-handed alpha
Helix 23	AC5	G	60	67	Right-handed alpha
Helix 24	AC6	G	68	75	Right-handed 310
Helix 25	AC7	G	101	110	Right-handed alpha
Helix 26	AC8	G	187	196	Right-handed alpha
Helix 27	AC9	H	537	558	Right-handed alpha
Helix 28	AD1	H	574	627	Right-handed alpha
Helix 29	AD2	H	645	654	Right-handed alpha
Helix 30	AD3	I	60	67	Right-handed alpha
Helix 31	AD4	I	68	75	Right-handed 310
Helix 32	AD5	I	101	110	Right-handed alpha
Helix 33	AD6	I	122	127	Right-handed alpha
Helix 34	AD7	I	187	195	Right-handed alpha
Helix 35	AD8	J	537	558	Right-handed alpha
Helix 36	AD9	J	574	624	Right-handed alpha
Helix 37	AE1	J	645	655	Right-handed alpha
Helix 38	AE2	K	60	67	Right-handed alpha
Helix 39	AE3	K	68	72	Right-handed 310
Helix 40	AE4	K	101	111	Right-handed alpha
Helix 41	AE5	K	187	196	Right-handed alpha
Helix 42	AE6	L	537	559	Right-handed alpha
Helix 43	AE7	L	574	627	Right-handed alpha
Helix 44	AE8	L	645	654	Right-handed alpha

There are 71 sheets in PDB entry 9N8P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4, AG5, AG6, AG7, AG8, AG9, AH1, AH2, AH3, AH4, AH5, AH6, AH7, AH8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	533	536	first strand
Strand 2	B	522	526	anti-parallel
Strand 3	A	6	11	anti-parallel
Strand 4	B	638	639	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	19	20	first strand
Strand 2	A	28	29	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	35	first strand
Strand 2	A	316	318	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	38	first strand
Strand 2	A	295	296	parallel
Strand 3	A	308	309	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	49	first strand
Strand 2	A	275	280	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	55	first strand
Strand 2	A	83	85	parallel
Strand 3	A	268	270	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	112	119	first strand
Strand 2	A	256	262	anti-parallel
Strand 3	A	176	184	anti-parallel
Strand 4	A	229	237	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	112	119	first strand
Strand 2	A	256	262	anti-parallel
Strand 3	A	176	184	anti-parallel
Strand 4	A	251	252	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	134	first strand
Strand 2	A	153	155	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	141	first strand
Strand 2	A	144	146	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	164	169	first strand
Strand 2	A	242	247	anti-parallel
Strand 3	A	202	205	anti-parallel
Strand 4	A	210	213	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	287	289	first strand
Strand 2	A	282	284	anti-parallel
Strand 3	A	303	304	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	531	536	first strand
Strand 2	D	522	528	anti-parallel
Strand 3	C	6	11	anti-parallel
Strand 4	D	637	640	anti-parallel
Strand 5	D	630	632	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	19	20	first strand
Strand 2	C	28	29	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	35	first strand
Strand 2	C	316	318	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	37	38	first strand
Strand 2	C	295	296	parallel
Strand 3	C	308	309	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	49	first strand
Strand 2	C	275	280	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	55	first strand
Strand 2	C	83	85	parallel
Strand 3	C	268	270	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	112	119	first strand
Strand 2	C	256	262	anti-parallel
Strand 3	C	176	184	anti-parallel
Strand 4	C	229	237	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	112	119	first strand
Strand 2	C	256	262	anti-parallel
Strand 3	C	176	184	anti-parallel
Strand 4	C	251	252	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	134	first strand
Strand 2	C	153	155	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	141	first strand
Strand 2	C	144	146	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	169	first strand
Strand 2	C	242	247	anti-parallel
Strand 3	C	202	205	anti-parallel
Strand 4	C	210	213	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	288	289	first strand
Strand 2	C	282	283	anti-parallel
Strand 3	C	303	304	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	531	536	first strand
Strand 2	F	522	528	anti-parallel
Strand 3	E	6	11	anti-parallel
Strand 4	F	637	640	anti-parallel
Strand 5	F	630	632	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	19	20	first strand
Strand 2	E	28	29	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	33	35	first strand
Strand 2	E	316	318	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	37	38	first strand
Strand 2	E	295	296	parallel
Strand 3	E	308	309	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	46	48	first strand
Strand 2	E	275	279	parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	54	57	first strand
Strand 2	E	83	85	parallel
Strand 3	E	268	270	parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	112	118	first strand
Strand 2	E	257	262	anti-parallel
Strand 3	E	175	184	anti-parallel
Strand 4	E	229	237	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	112	118	first strand
Strand 2	E	257	262	anti-parallel
Strand 3	E	175	184	anti-parallel
Strand 4	E	251	252	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	136	141	first strand
Strand 2	E	144	146	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	164	169	first strand
Strand 2	E	242	247	anti-parallel
Strand 3	E	202	206	anti-parallel
Strand 4	E	209	213	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	282	283	first strand
Strand 2	E	303	304	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	533	536	first strand
Strand 2	H	522	526	anti-parallel
Strand 3	G	6	11	anti-parallel
Strand 4	H	637	640	anti-parallel
Strand 5	H	630	632	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	18	20	first strand
Strand 2	G	28	30	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	33	35	first strand
Strand 2	G	316	318	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	37	38	first strand
Strand 2	G	295	296	parallel
Strand 3	G	308	309	parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	49	first strand
Strand 2	G	274	280	parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	54	57	first strand
Strand 2	G	83	85	parallel
Strand 3	G	268	270	parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	112	118	first strand
Strand 2	G	257	262	anti-parallel
Strand 3	G	176	184	anti-parallel
Strand 4	G	229	237	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	112	118	first strand
Strand 2	G	257	262	anti-parallel
Strand 3	G	176	184	anti-parallel
Strand 4	G	251	252	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	130	134	first strand
Strand 2	G	153	156	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	136	141	first strand
Strand 2	G	144	146	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	164	169	first strand
Strand 2	G	242	247	anti-parallel
Strand 3	G	202	205	anti-parallel
Strand 4	G	210	213	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	282	283	first strand
Strand 2	G	303	304	anti-parallel

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There are 5 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	531	536	first strand
Strand 2	J	522	528	anti-parallel
Strand 3	I	6	11	anti-parallel
Strand 4	J	637	640	anti-parallel
Strand 5	J	630	632	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	18	20	first strand
Strand 2	I	28	30	anti-parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	33	35	first strand
Strand 2	I	316	318	anti-parallel

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There are 3 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	37	38	first strand
Strand 2	I	295	296	parallel
Strand 3	I	308	309	parallel

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There are 2 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	46	49	first strand
Strand 2	I	275	280	parallel

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There are 3 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	54	55	first strand
Strand 2	I	83	85	parallel
Strand 3	I	268	270	parallel

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There are 5 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	98	99	first strand
Strand 2	I	229	237	parallel
Strand 3	I	176	184	anti-parallel
Strand 4	I	257	262	anti-parallel
Strand 5	I	112	118	anti-parallel

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There are 4 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	98	99	first strand
Strand 2	I	229	237	parallel
Strand 3	I	176	184	anti-parallel
Strand 4	I	251	252	anti-parallel

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There are 2 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	130	134	first strand
Strand 2	I	153	156	anti-parallel

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There are 2 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	136	141	first strand
Strand 2	I	144	146	anti-parallel

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There are 2 strands in AG4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	164	169	first strand
Strand 2	I	242	247	anti-parallel

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There are 2 strands in AG5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	202	205	first strand
Strand 2	I	210	213	anti-parallel

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There are 2 strands in AG6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	282	283	first strand
Strand 2	I	303	304	anti-parallel

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There are 5 strands in AG7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	531	536	first strand
Strand 2	L	522	528	anti-parallel
Strand 3	K	6	11	anti-parallel
Strand 4	L	638	640	anti-parallel
Strand 5	L	630	632	anti-parallel

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There are 2 strands in AG8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	19	20	first strand
Strand 2	K	28	29	anti-parallel

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There are 2 strands in AG9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	33	35	first strand
Strand 2	K	316	318	anti-parallel

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There are 3 strands in AH1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	37	38	first strand
Strand 2	K	295	296	parallel
Strand 3	K	308	309	parallel

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There are 2 strands in AH2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	46	48	first strand
Strand 2	K	275	279	parallel

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There are 3 strands in AH3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	54	55	first strand
Strand 2	K	83	85	parallel
Strand 3	K	268	270	parallel

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There are 4 strands in AH4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	112	119	first strand
Strand 2	K	256	262	anti-parallel
Strand 3	K	175	184	anti-parallel
Strand 4	K	229	230	anti-parallel

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There are 5 strands in AH5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	131	134	first strand
Strand 2	K	151	155	anti-parallel
Strand 3	K	251	254	anti-parallel
Strand 4	K	175	184	anti-parallel
Strand 5	K	233	237	anti-parallel

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There are 2 strands in AH6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	136	141	first strand
Strand 2	K	144	146	anti-parallel

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There are 4 strands in AH7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	164	169	first strand
Strand 2	K	242	247	anti-parallel
Strand 3	K	202	205	anti-parallel
Strand 4	K	210	213	anti-parallel

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There are 2 strands in AH8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	282	283	first strand
Strand 2	K	303	304	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 9N8P

Analysis of interatomic Contacts of Structural Units in PDB entry:
9N8P